1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CTCACTTGGTGCTGGCCCGGTACCGGCTCTTCTTCTTCCAGAGATATTTGCATCCCGAATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGGgtatatacatatatctataggttttatgggttcagaacagagtttcttctctctgtttctaatgttttgtttctcttttgccctaacag
species | Arabidopsis thaliana |
transcript | AT5G16150.3 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CATCCCGAATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGG ATATCAAACTTTGTGATCGGACTATACTTCTTAAGCGTTGTGACTAAATTCEST: gi|125029346|gb|EL101615.1|EL101615
genomic: CATCCCGAATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGGgtatatacat ... gccctaacagATATCAAACTTTGTGATCGGACTATACTTCTTAAGCGTTGTGACTAAATTC
EST: CATCCCGAATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGG ATATCAAACTTTGTGATCGGACTATACTTCEST: gi|164132213|gb|ES146862.1|ES146862
genomic: CATCCCGAATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGGgtatatacat ... gccctaacagATATCAAACTTTGTGATCGGACTATACTTC
EST: AATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGG ATATCAAACTTTGTGATCGGACTATACTTCTTAAGCGTTGTGACTAAATTCEST: gi|163967359|gb|ES038684.1|ES038684
genomic: AATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGGgtatatacat ... gccctaacagATATCAAACTTTGTGATCGGACTATACTTCTTAAGCGTTGTGACTAAATTC
EST: AATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGTCATGCACTGG ATATCAAACTTTGTGATCGGACTATACTTCTTAAGTCGTTGTGACTAAATTEST: gi|164055840|gb|ES203705.1|ES203705
genomic: AATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGG-CATGCACTGGgtatatacat ... gccctaacagATATCAAACTTTGTGATCGGACTATACTTCTTAAG-CGTTGTGACTAAATT
EST: AATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGTCATGCACTGG ATATCAAACTTTGTGATCGGACTATACTTCTTAAGCGTTGTGACTAAATTCEST: gi|86081281|gb|DR377038.1|DR377038
genomic: AATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGG-CATGCACTGGgtatatacat ... gccctaacagATATCAAACTTTGTGATCGGACTATACTTCTTAAGCGTTGTGACTAAATTC
EST: CATCCCGAATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGG ATATCAAACTTTGTGATCGGACTATACTTCTTAAGCGTTGTGACTAAATTC
genomic: CATCCCGAATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGGgtatatacat ... gccctaacagATATCAAACTTTGTGATCGGACTATACTTCTTAAGCGTTGTGACTAAATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCACTTGGTGCTGGCCCGGTACCGGCTCTTCTTCTTCCAGAGATATTTGCATCCCGAATCAGAGCAAAAGCCGTCGCTCTTTCTCTCGGCATGCACTGGgtatatacatatatctataggttttatgggttcagaacagagtttcttctctctgtttctaatgttttgtttctcttttgccctaacag
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