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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTTTGAAAGCCTCTTCAAGTCATTTGAAAACTTCATTCTGAACACATACAAATCAAAATTCACCCAGgtagtccatatagctatcatattttgcataattatgtacatattcttctagactctagcatggtcgacatgaaatgtctcggtttatactcactttctatatcatctgcag

Basic information

species Arabidopsis thaliana
transcript AT2G34750.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|164181042|gb|ES068806.1|ES068806
EST:     AGTCATTTG-AAACTTCATTCTGAACACATACAAATCAAAATTCACCCAG                         TTTCTGATATTCTATGCCTGC
genomic: AGTCATTTGAAAACTTCATTCTGAACACATACAAATCAAAATTCACCCAGgtagtccata ... tcatctgcagTTTCTGATATTCTATGCCTGC
EST: gi|164073097|gb|ES056428.1|ES056428
EST:     AGTCATTTGAAAACTTCATTCTGAACACATACAAATCAAAATTCACCCAG                         TTTCTGATATTCTATGCCTGCTCACTGGATCC
genomic: AGTCATTTGAAAACTTCATTCTGAACACATACAAATCAAAATTCACCCAGgtagtccata ... tcatctgcagTTTCTGATATTCTATGCCTGCTCACTGGATCC