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AATTTCATCTTGTGGCCTTTGTTTCAAATTAGAAGCTTCACCTTCTCCAGCTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAGgtatctaaaccttacgaacctttaagccttactcagacttagattttatcaactaaaactcaaaaacacttaatgataaataggattttgtgtcattatt...
species | Arabidopsis thaliana |
transcript | AT4G21670.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAG ACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTACEST: gi|116485373|gb|EG527965.1|EG527965
genomic: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAGgtatctaaac ... cttcttgcagACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTAC
EST: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAG ACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTACEST: gi|116436538|gb|EG479130.1|EG479130
genomic: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAGgtatctaaac ... cttcttgcagACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTAC
EST: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAG ACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTACEST: gi|116464539|gb|EG507131.1|EG507131
genomic: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAGgtatctaaac ... cttcttgcagACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTAC
EST: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAG ACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTACEST: gi|116444414|gb|EG487006.1|EG487006
genomic: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAGgtatctaaac ... cttcttgcagACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTAC
EST: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAG ACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTAC
genomic: CTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAGgtatctaaac ... cttcttgcagACAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATTTCATCTTGTGGCCTTTGTTTCAAATTAGAAGCTTCACCTTCTCCAGCTCAGGAGTCACTCAGTTTATTCTACTCGTCCTGTCTCAGGGACAACAAGgtatctaaaccttacgaacctttaagccttactcagacttagattttatcaactaaaactcaaaaacacttaatgataaataggattttgtgtcattatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttactc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aactaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaatagga