Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86078955|gb|DR374712.1|DR374712EST: GTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAG GTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
genomic: GTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAGgtaccagctt ... tcattctcagGTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
EST:
gi|164001942|gb|ES108970.1|ES108970EST: TCGTCGTGTGCGGTGAAGGACTCAG GTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
genomic: TCGTCGTGTGCGGTGAAGGACTCAGgtaccagctt ... tcattctcagGTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
EST:
gi|116480003|gb|EG522595.1|EG522595EST: GTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAG GTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
genomic: GTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAGgtaccagctt ... tcattctcagGTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
EST:
gi|125092211|gb|EL150034.1|EL150034EST: TGTGCGGTGAAGGACTCAG GTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
genomic: TGTGCGGTGAAGGACTCAGgtaccagctt ... tcattctcagGTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
EST:
gi|116472980|gb|EG515572.1|EG515572EST: GTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAG GTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
genomic: GTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAGgtaccagctt ... tcattctcagGTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTACAAAAGCTTAGG
EST:
gi|125204270|gb|EL219224.1|EL219224EST: GTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAG GTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTA
genomic: GTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAGgtaccagctt ... tcattctcagGTCGTTGGCGGCTGTATCAAAGCTCCACGGAGAAGGGTA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGAGATTCACCATGATCAATGACGAATTCGCCCTCCGTGTTGTGGAGGCTGTCCCGGACAAAGAGAGTAAAGTGCTCGTCGTGTGCGGTGAAGGACTCAGgtaccagctttatatgttgcattttggttaatcattgccagttttagtccagattttagagaaacttatcaaactaaataaactattaatcaatcgatttgatcatagaatcttttggtttggatagtataaattaaactgaactctttggttcggtttggttgttataaatggtgttgcttttcaatctcattctcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA