1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CTTCTCTCAGATTCACAGCTGGATTCGTCTCCGCTAGTCCCAATGGCTCCTCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGgtttttttgccattttccacttttcttcactctcgaaactatggattctttagattaacttagggattgtgtttgcag
species | Arabidopsis thaliana |
transcript | AT1G02560.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAG GAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAAEST: gi|125301425|gb|EL315510.1|EL315510
genomic: CGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGgtttttttgc ... gtgtttgcagGAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAA
EST: TTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAG GAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAATTCAACTCCEST: gi|124717675|gb|EH809077.1|EH809077
genomic: TTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGgtttttttgc ... gtgtttgcagGAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAATTCAACTCC
EST: TCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAG GAAGACGAATAAGEST: gi|125290511|gb|EL304596.1|EL304596
genomic: TCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGgtttttttgc ... gtgtttgcagGAAGACGAATAAG
EST: TCTTTCGATTCTCCCGAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAG GAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAATTCAACTCCEST: gi|124707491|gb|EH798893.1|EH798893
genomic: TCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGgtttttttgc ... gtgtttgcagGAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAATTCAACTCC
EST: CGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAG GAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTEST: gi|125233713|gb|EL247798.1|EL247798
genomic: CGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGgtttttttgc ... gtgtttgcagGAAGACGAATAAGTTAGTTAGCGATAGAAAGAATT
EST: TCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAG GAAGACGAATAAG
genomic: TCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGgtttttttgc ... gtgtttgcagGAAGACGAATAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTCTCTCAGATTCACAGCTGGATTCGTCTCCGCTAGTCCCAATGGCTCCTCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGgtttttttgccattttccacttttcttcactctcgaaactatggattctttagattaacttagggattgtgtttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT