1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaaatactgtagcaatggattagttagtagtactcaacatttgtttttgccaaagaaagctttgcttgtacaccttgtttgataaatatttgtatataacttaacaattcttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGAGATGTTGAGTTCAAAGCTTTGCTCTTTATCCCCCCGAAGGCTCCACATG
species | Zea mays |
transcript | GRMZM2G141931_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTACGTGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|67017884|gb|CO446633.1|CO446633
genomic: ATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|60344141|gb|DN211114.1|DN211114
genomic: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: GGAGGTTACCGAGGAAGGAATACTCGAAGTTTTCCCATTCACTAGCCAAG GACTTCGGGGATGACAAGCTTATGGGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|21987199|gb|BQ778727.1|BQ778727
genomic: GGAGGTTACCGATGAA-GAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|21987561|gb|BQ779089.1|BQ779089
genomic: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|67040100|gb|CO466355.1|CO466355
genomic: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
genomic: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
cttgtacaccttgtttgataaatatttgtatataacttaacaattcttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGAGATGTTGAGTTCAAAGCTTTGCTCTTTATCCCCCCGAAGGCTCCACATG
acttaac putative branch site (score: 3)
ttcttttttc putative PPT
tttgataaatatttgt TA-rich tract