1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtatccttgtaaattgcactgatggattgttgccatttgttctcatatcctctcagttacatgtctaatccttaactttacatagATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATTGACAAAATCATTGAAATTACATCTGGTACCGCTGAGGGGTGCAACTTTG
species | Zea mays |
transcript | GRMZM2G121427_T01 |
intron # | 8 |
splice site | 3' |
intron type | U12 (go to U12 genes for details) |
EST: AGCGGCATCATCCTAGGCTTGTAGAGACCGACAACCCTTCTGGCTGTAAG ATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATTEST: gi|20802387|gb|BQ293437.1|BQ293437
genomic: AGCGGCATCATCCTAGGCTTGTAGAGACCGACAACCCTTCTGGCTGTAAGgtatccttgt ... ctttacatagATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATT
EST: AGCGGCATCATCCTAGGCTTGTAGAGACCGACAACCCTTCTGGCTGTAAG ATCACTGTCAAGGAGTGCCACAGTGAAGATTCCCAATGCGCATTTGTTATTEST: gi|18053134|gb|BM318792.1|BM318792
genomic: AGCGGCATCATCCTAGGCTTGTAGAGACCGACAACCCTTCTGGCTGTAAGgtatccttgt ... ctttacatagATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATT
EST: AGCGGCATCATCCTAGGCTTGTAGAGACCGACAACCCTTCTGGCTGTAAG ATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATTEST: gi|78545014|gb|DV622512.1|DV622512
genomic: AGCGGCATCATCCTAGGCTTGTAGAGACCGACAACCCTTCTGGCTGTAAGgtatccttgt ... ctttacatagATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATT
EST: AGCGGCATCATCCTAGGCTTGTAGAGACCGACAACCCTTCTGGCTGTAAG ATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATT
genomic: AGCGGCATCATCCTAGGCTTGTAGAGACCGACAACCCTTCTGGCTGTAAGgtatccttgt ... ctttacatagATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATT
tgccatttgttctcatatcctctcagttacatgtctaatccttaactttacatagATCACTGTCAAGGAGTGCCACAGTGAAGATTCACAATGCGCATTTGTTATTGACAAAATCATTGAAATTACATCTGGTACCGCTGAGGGGTGCAACTTTG
atccttaac putative branch site
ttaacttta TA-rich tract