1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtacctcctgtcctcctcagaagttatttctgcaaagcagttgtttgggaactactgaaccgttgcctgctatccagCTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATGTGGAAAAGCAATTTCATTGTGAAAACCGTCTCTAAATCGAAG
species | Zea mays |
transcript | GRMZM2G471805_T01 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CTCTAATGGAGACAATTACTGCATTATCTGGTCCCAAAACAAAAATATTG CTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATGEST: gi|60395803|gb|DN228673.1|DN228673
genomic: CTCTAATGGAGACAATTACTGCATTATCTGGTCCCAAAACAAAAATATTGgtacctcctg ... tgctatccagCTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATG
EST: CTCTAATGGAGACAATTACTGCATTATCTGGTCCCAAAACAAAAATATTG CTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATGEST: gi|211175782|gb|FL245447.1|FL245447
genomic: CTCTAATGGAGACAATTACTGCATTATCTGGTCCCAAAACAAAAATATTGgtacctcctg ... tgctatccagCTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATG
EST: CTCTAATGGAGACAATTACTGCATTATCTGGTCCCAAAACAAAAATATTG CTAGGATACGAGATCCGTTCGGCCACCGTCCATGARAAGATGATGGAAATGEST: gi|211341427|gb|FL403611.1|FL403611
genomic: CTCTAATGGAGACAATTACTGCATTATCTGGTCCCAAAACAAAAATATTGgtacctcctg ... tgctatccagCTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATG
EST: CTCTAATGGAGACAATTACTGCATTATCTGGTCCCAAAACAAAAATATTG CTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATG
genomic: CTCTAATGGAGACAATTACTGCATTATCTGGTCCCAAAACAAAAATATTGgtacctcctg ... tgctatccagCTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacctcctgtcctcctcagaagttatttctgcaaagcagttgtttgggaactactgaaccgttgcctgctatccagCTAGGATACGAGATCCGTTCGGCCACCGTCCATGAGAAGATGATGGAAATGTGGAAAAGCAATTTCATTGTGAAAACCGTCTCTAAATCGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA