1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...gttttcctctttcctatgcttttcgtagatccagctttcggcactgggtttctctttttatacactcattgacatccaatctttgaatgtaacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTGGTCCACAGCTTCTCTACACAATATTTTCGTCAGTCTGTGTGGTAGCCT
species | Zea mays |
transcript | GRMZM2G412899_T01 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|78119069|gb|DV537453.1|DV537453
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|71760454|gb|DR958391.1|DR958391
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|71321128|gb|DR797263.1|DR797263
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|78110186|gb|DV528601.1|DV528601
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|71759302|gb|DR957239.1|DR957239
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|148974491|gb|EE025274.2|EE025274
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|101396769|gb|EB820310.1|EB820310
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|211453092|gb|FL443675.1|FL443675
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|76015719|gb|DT942889.1|DT942889
genomic: CGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|211329247|gb|FL462804.1|FL462804
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: GCTCTCTGCATGTCTGTACATTGG AYCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|50326105|gb|CO521231.1|CO521231
genomic: GCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGG ATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTEST: gi|74240465|gb|DT648379.1|DT648379
genomic: CTAATAAAATCCGAGCTAAGGCTATGGCTCTCTGCATGTCTGTACATTGGgtaagaactc ... aacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTT
EST: ATGTCTGTACATTGG ATCGGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACT
genomic: ATGTCTGTACATTGGgtaagaactc ... aacttggcagATC-GTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACT
gggtttctctttttatacactcattgacatccaatctttgaatgtaacttggcagATCGTGAACTTCTTTGTTAGTTTGATGTTCTTGCGTCTTCTGGAGCAACTTGGTCCACAGCTTCTCTACACAATATTTTCGTCAGTCTGTGTGGTAGCCT
atgtaac putative branch site (score: 152)
tctttttata TA-rich tract