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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttgatacctttacctctttcaacggaaaaaaaaggggggggggggggggtgaagcaagggtaacttctaactcacgaacaatcatggtgttgcattgcagGTGCCATATCTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAGAAGATACTACCTTACTTATTCCAGCAGTACCCAGTTAGTAGTATCTAGC

Basic information

species Zea mays
transcript GRMZM2G086971_T03
intron # 7
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5740116|gb|AI947806.1|AI947806
EST:     AGGGATCGTCGAGGACGGATTTGCTTCTAAGGAAGTCGGGCTCTAAGCAG                         GTGCCATATCTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAG
genomic: AGGGATCGTCGAGGACGGATTTGCTTCTAAGGAAGTCGGGCTCTAAGCAGgtaataataa ... tgcattgcagGTGCCATATCTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAG
EST: gi|78125582|gb|DV543966.1|DV543966
EST:     AGGGATCGTCGAGGACGGATTTGCTTTTAAGGAAGTCGGGCTTTAAGCAG                         GTGCCATATTTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAG
genomic: AGGGATCGTCGAGGACGGATTTGCTTCTAAGGAAGTCGGGCTCTAAGCAGgtaataataa ... tgcattgcagGTGCCATATCTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAG
EST: gi|76012728|gb|DT939898.1|DT939898
EST:     AGGGGTCGTCGAGGACGGATTTGCTTCTAAGGAAGTCGGGCTCTAAGCAG                         GTGCCATATCTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAG
genomic: AGGGATCGTCGAGGACGGATTTGCTTCTAAGGAAGTCGGGCTCTAAGCAGgtaataataa ... tgcattgcagGTGCCATATCTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAG
EST: gi|32938253|gb|CF043072.1|CF043072
EST:     AGGGATCGTCGAGGACGGATTTGCTTGTAAGGAAGTCGGGCTCTAAGCAG                         GTGCCGTATCTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAG
genomic: AGGGATCGTCGAGGACGGATTTGCTTCTAAGGAAGTCGGGCTCTAAGCAGgtaataataa ... tgcattgcagGTGCCATATCTGATCGACCCTAACACTGGATTCCAGTCGGGCGACCATAAG