1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtacggacgatctatctcaaatgttcgacaacctggtttggttttgttttgctttccttgtctagagaaggcactgaatgttcttccgcgtcacggggatacttgcagATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTATGAGGACCTAGCCATGCGCGATGTGATGGAGAGTGGCGACTGGTCCGACG
species | Zea mays |
transcript | GRMZM2G123544_T01 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAG ATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTATEST: gi|5791066|gb|AI977858.1|AI977858
genomic: TGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAGgtacggacga ... atacttgcagATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTAT
EST: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAG ATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTATEST: gi|30706228|gb|CD059068.1|CD059068
genomic: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAGgtacggacga ... atacttgcagATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTAT
EST: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAG ATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTATEST: gi|31352160|gb|CD436517.1|CD436517
genomic: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAGgtacggacga ... atacttgcagATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTAT
EST: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAG ATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTATEST: gi|31361627|gb|CD445984.1|CD445984
genomic: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAGgtacggacga ... atacttgcagATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTAT
EST: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAG ATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTATEST: gi|160481446|gb|EY254550.1|EY254550
genomic: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAGgtacggacga ... atacttgcagATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTAT
EST: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAG ATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTAT
genomic: ATGCTGAAACTGATGAAGATCTATCCGATGAAGAAAGAGACATGCACGAGgtacggacga ... atacttgcagATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacggacgatctatctcaaatgttcgacaacctggtttggttttgttttgctttccttgtctagagaaggcactgaatgttcttccgcgtcacggggatacttgcagATAGATGCAGGCTCTGTGGACGAGCACTCGACCAAGTCAGACGAGGAGTATGAGGACCTAGCCATGCGCGATGTGATGGAGAGTGGCGACTGGTCCGACG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA