Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagcgacaagagaaacaattaaattagtaggccgattgtgcccttctgagatgatccatgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTCGTCGCCCTTTTTCTGCTGGTTTACTACTTGACCAGGTAGAAGACATGAC

Basic information

species Zea mays
transcript GRMZM2G101571_T02
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G101571_T02 (Zea mays), 3'ss of exon 5
lower sequence: LOC_Os02g57510.4 (Oryza sativa), 3'ss of exon 5
gtaagcgacaagagaa-acaattaaatt---agtaggccgattgtgc--ccttctgaga---tgatccatgt-----gtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTCGTCGCCCTTTTTCTGCTGGTTTACTACTTGACCAGGTAGAAGACATGAC--
|||| |    | | |  |||||     |   |  |  ||    ||     || ||||||     ||  ||||      |  |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||   |||  
gtaaacactcacacagtacaatcttccttccatcataccatccgtatattctgctgagaccgcaattgatgtctacgatatagGTTTTTGAGACCAAATCAAGTCGGAGGATGGGAACCCTCGTAGCATCATTCGTTGCGCTTTTTCTGCTGGTATACTACTTGACCAGGTAGAAGAG--GACCA

upper sequence: GRMZM2G101571_T02 (Zea mays), 3'ss of exon 5
lower sequence: Vv05s0051g00940.t01 (Vitis vinifera), 3'ss of exon 5
-------------------gtaagcgacaagagaaacaattaaatt-------agtaggcc-------gattgtgcccttctgagatgatccatgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTCGTCGCCCTTTTTCTGCTGGTTTACTACTTGACCAGGTAGAAGACATGAC
                      | | |   | | || | ||   ||       |  | ||        || || ||       | ||| |  || ||   |||| |||||||||||||||||||||||||||   || ||  | ||||| || || | | |||| ||  |  | |||||| |||| ||||| | || |    
gtaagtagactagataacctctatctattggtgtaatattttgctttctcgaaaacatgctttttcttgactgggcatgatgaatatgtttgatctgactagGTGTTTGAGACCAAATCAAGCCGGAGGATGTTTACGCTTATTGCATCGTTTGTGGTCATTTTCCTAGTCATATACTACCTGACTAGGTAAATGATACACT

upper sequence: GRMZM2G101571_T02 (Zea mays), 3'ss of exon 5
lower sequence: Vv07s0005g02990.t01 (Vitis vinifera), 3'ss of exon 5
----------------------------------------gtaagcgacaagagaaacaattaaattagtaggccgattgtgcccttctgagatgatccatgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTCGTCGCCCTTTTTCTGCTGGTTTACTACTTGACCAGGTAGAAGACATGAC
                                        ||  ||       |    ||   |    ||| |  |  || ||  |  |||| |  |   |||   |||||||||||||| | ||||||||||||||||   || || || ||||||||||| |   |||| ||  |  | |||||  | || ||||  || || |   
gtatgatcatgataacctgtattcttctccaaaatgtttagtttgctgtttttggtggaacacatgctgtatgttggctgggca-tgatgagtttgtt--tgttctcagGTATTTGAGACAAGATCAAGCCGGAGGATGTTTACACTTGTGGCATCATTCGTGGTTATTTTCCTAATCATATACTATCTCACTAGGTGAAAAACCTATG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60345631|gb|DN212604.1|DN212604
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|37622088|gb|CF675141.1|CF675141
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|87154400|gb|DY399189.1|DY399189
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|92088107|gb|EB484338.1|EB484338
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211216835|gb|FL144756.1|FL144756
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|78021287|gb|DV489674.1|DV489674
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304813|gb|FL144776.1|FL144776
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAG-ATGGGAACC-TCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|33097946|gb|CF057906.1|CF057906
EST:     TGGCTACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACTAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|87155055|gb|DY399844.1|DY399844
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|32868635|gb|CF008317.1|CF008317
EST:     TGGCTACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACTAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|74240317|gb|DT648231.1|DT648231
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211216837|gb|FL144758.1|FL144758
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGAC-GTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211216833|gb|FL144754.1|FL144754
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAG-ATGGGAACC-TCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|28910030|gb|CB331222.1|CB331222
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211306828|gb|FL144778.1|FL144778
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAG-ATGGGAACC-TCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|93281723|gb|EB673987.1|EB673987
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGCCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304811|gb|FL144774.1|FL144774
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304800|gb|FL144763.1|FL144763
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|5871387|gb|AW017858.1|AW017858
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304807|gb|FL144770.1|FL144770
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGANCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|6031335|gb|AW076192.1|AW076192
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304806|gb|FL144769.1|FL144769
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAG-ATGGGAACC-TCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|21394168|gb|BQ538598.1|BQ538598
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|26455131|gb|CA826714.1|CA826714
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304808|gb|FL144771.1|FL144771
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|60348036|gb|DN215009.1|DN215009
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|33093600|gb|CF053594.1|CF053594
EST:     TGGCTACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACTAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|22546781|gb|BU099092.1|BU099092
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|60343725|gb|DN210698.1|DN210698
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304809|gb|FL144772.1|FL144772
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCATCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211216840|gb|FL144761.1|FL144761
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211306827|gb|FL144777.1|FL144777
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAG-ATGGGAACC-TCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304812|gb|FL144775.1|FL144775
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304803|gb|FL144766.1|FL144766
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCA
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCA
EST: gi|71328891|gb|DR801128.1|DR801128
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211216839|gb|FL144760.1|FL144760
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAG-ATGGGAACC-TCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304801|gb|FL144764.1|FL144764
EST:     TGGATACTTCAAGGGGTTTTCTGNCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCANGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|28910937|gb|CB331689.1|CB331689
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCCAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|32856010|gb|CD995691.1|CD995691
EST:     GACCGTGGACAAATTCAAGATG                         GTATTTGAGACTAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: GACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|30160483|gb|CB924212.1|CB924212
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|14255659|gb|BG878567.1|BG878567
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
EST: gi|211304805|gb|FL144768.1|FL144768
EST:     TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATG                         GTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC
genomic: TGGATACTTCAAGGGGTTTTCTGTCTGGGACCGTGGACAAATTCAAGATGgtaagcgaca ... atgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaacaattaaattagtaggccgattgtgcccttctgagatgatccatgtgtgcagGTATTTGAGACCAAATCAAGCCGGAGGATGGGAACCCTCGTCGCATCATTCGTCGCCCTTTTTCTGCTGGTTTACTACTTGACCAGGTAGAAGACATGAC
     attaaattagta  TA-rich tract