Sequence
atgc intronic sequence ATGC exonic sequencegtaagctcaaaacatcagctgcatttcataaattgttttgcttccaatgtattgtactaccttttctgttcatttatttgggatgtgtcaacttcagGTTGGGCTCCAAAGTTGCAATGTTCCAGTATTCCTCAGTCGAAATTTACAATGCCTGCAAACCACAGCCTACTCTTGAGTTTCACAATCCCGATATGCAC
Basic information
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GRMZM2G428386_T01 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os04g59540.1 (Oryza sativa), 3'ss of exon 4
---gtaagctcaaaacatcagctgcatttcataaattgttttgcttccaatgtattgtactaccttttctgttcatttatttgggatg-tgtcaacttcagGTTGGGCTCCAAAGTTGCAATGTTCCAGTATTCCTCAGTCGAAATTTACAATGCCTGCAAACCACAGCCTACTCTTGAGTTTCACAATCCCGATATGCAC
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aacggcatcatacattaaaatatggaggtagtacat-actaaacatcctttagcccttctttatttctttcttcttttgttggaaaaaatggtgacttcagGTTGGGTTCCAAAGTTGCAAAGTTCCAATATTCATCAGTTGAAATTTACACTGCCTGCAAACCGCAACGAACCCTTGAGTTTCACAATCCCGATATGCGTMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211402660|gb|FL023536.1|FL023536EST: CTGTCAATATGCGGGCATTCACTCAATACCGATTGTCTGCGCTTTTTTGG GTTGGGCTCCAAAGTTGCAATGTTCCAGTATTCCTCAGTCGAAATTTACAA
genomic: CTGTCAATATGCGGGCATTCACTCAATACCGATTGTCTGCGCTTTTTTGGgtaagctcaa ... tcaacttcagGTTGGGCTCCAAAGTTGCAATGTTCCAGTATTCCTCAGTCGAAATTTACAA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tccaatgtattgtactaccttttctgttcatttatttgggatgtgtcaacttcagGTTGGGCTCCAAAGTTGCAATGTTCCAGTATTCCTCAGTCGAAATTTACAATGCCTGCAAACCACAGCCTACTCTTGAGTTTCACAATCCCGATATGCAC
ttcatttattt TA-rich tract