1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaatgggatatgatgcagtcaatttagtttgactatggtgattgtagtaaatgctcttatgctttgtttttattgtttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAGGGTTATGAATCTCTCTGAGTATCGCAAAAACCTTTATGAGTATCTTGT
species | Zea mays |
transcript | GRMZM2G144995_T01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|67014948|gb|CO443697.1|CO443697
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|19822271|gb|BQ048295.1|BQ048295
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: TGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|60343903|gb|DN210876.1|DN210876
genomic: TGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|166625250|gb|EG177341.1|EG177341
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: GAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|61117658|gb|DN558619.1|DN558619
genomic: GAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGGCAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|149046499|gb|EE048023.2|EE048023
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCACCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGAEST: gi|21843447|gb|BQ704028.1|BQ704028
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|29577152|gb|CB617264.1|CB617264
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|29576730|gb|CB616842.1|CB616842
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGTATCAATGTCCAGCAATTTGCCCAAEST: gi|61117659|gb|DN558620.1|DN558620
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTG-ATCAATGTCCAGCAATTTGCCCAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|60398869|gb|DN231685.1|DN231685
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|61117660|gb|DN558621.1|DN558621
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|31406129|gb|CD484861.1|CD484861
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|26557378|gb|CA829613.1|CA829613
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|5005736|gb|AI711798.1|AI711798
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|67016760|gb|CO445509.1|CO445509
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCCNGATCTTTCACCAGTTGATTTGATCAATGTCCACCAATTTGCCCAAAEST: gi|29946670|gb|CB816266.1|CB816266
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|61117656|gb|DN558617.1|DN558617
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAEST: gi|148932756|gb|EE285396.2|EE285396
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAA
EST: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGG GCCAGGATCTGT
genomic: CGACGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGgtaatgggat ... ttgttttcagGCCAGGATCTGT
actatggtgattgtagtaaatgctcttatgctttgtttttattgtttgttttcagGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAGGGTTATGAATCTCTCTGAGTATCGCAAAAACCTTTATGAGTATCTTGT
gtttgac putative branch site (score: 253)
tttgttttc putative PPT
tttgtttttattgttt TA-rich tract