1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...aaaatacagatcaatgtcttcttgcctaactagcagccttttcaatgcgttattttatgttcatcctgaaaacaaatgttcggtttttccggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGATCTCCTGCACGGAGTCTCAGCAGGTCACCGCCGCTGCCGCCGCCTCCT
species | Zea mays |
transcript | GRMZM2G027105_T04 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|60350338|gb|DN217311.1|DN217311
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|71759159|gb|DR957096.1|DR957096
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|20337024|gb|BQ172654.1|BQ172654
genomic: AAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: GCTATAGCAGAAG CCCGCGAGGTCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|21331667|gb|BQ487048.1|BQ487048
genomic: GCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGGTCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|148953639|gb|EC898996.2|EC898996
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|22489522|gb|BU049445.1|BU049445
genomic: AGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|18384821|gb|BM418020.1|BM418020
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|71438201|gb|DR819251.1|DR819251
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|22489415|gb|BU049338.1|BU049338
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|15177619|gb|BI398558.1|BI398558
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAEST: gi|88758547|gb|DY542916.1|DY542916
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGA
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|18053132|gb|BM318790.1|BM318790
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|26456505|gb|CA828088.1|CA828088
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGGTCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|20803218|gb|BQ294268.1|BQ294268
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGGTCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|18178383|gb|BM379593.1|BM379593
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: GCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|71449212|gb|DR830262.1|DR830262
genomic: GCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|17970002|gb|BM276770.1|BM276770
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|18384819|gb|BM418018.1|BM418018
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCEST: gi|87298765|gb|DY470768.1|DY470768
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATC
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|18053144|gb|BM318802.1|BM318802
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|71317875|gb|DR795704.1|DR795704
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|71758988|gb|DR956925.1|DR956925
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: CAAGCTATAGCAGAAG CCCGCGAGATGGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|18384989|gb|BM418188.1|BM418188
genomic: CAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|15188220|gb|BI417197.1|BI417197
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGGCGAAGTTACAGCAGGTCGCCACTGGEST: gi|50333998|gb|CO529124.1|CO529124
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGG-CGAAGTTACAGCAGGTCGCCACTGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|18384820|gb|BM418019.1|BM418019
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|50338081|gb|CO533207.1|CO533207
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|71317873|gb|DR795703.1|DR795703
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: CTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGGGAAGTTACAGCAGGTCGCCACTGGGEST: gi|22489184|gb|BU049107.1|BU049107
genomic: CTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|71438000|gb|DR819050.1|DR819050
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGEST: gi|18383855|gb|BM417055.1|BM417055
genomic: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
EST: AGCCGCAGCCGCAGCCCAAGATATCGAAGGAGCCCAAGCTATAGCAGAAG CCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
genomic: AGCCGCAGCC-CA----A-GATATCGAAGGAGCCCAAGCTATAGCAGAAGgtaatttgct ... ggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGG
tgcgttattttatgttcatcctgaaaacaaatgttcggtttttccggagctacagCCCGCGAGATCGTTCTCCTAGGAGGCGAAGTTACAGCAGGTCGCCACTGGGATCTCCTGCACGGAGTCTCAGCAGGTCACCGCCGCTGCCGCCGCCTCCT
tttttccg CT-rich tract
tattttatgttcat TA-rich tract