1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtatattaaatgaccctgatattgtgttacttcgtagattttacttttacagctttgagttatgacctaccatgcatgatagttggtagaaatctttttggtttcaattttacatgtgctagtgcattaataacttctctttctctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATGTTATAAATGTAAAACAAATCGCAAAA
species | Zea mays |
transcript | GRMZM2G181359_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148939474|gb|EC884049.2|EC884049
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|32909117|gb|CF013929.1|CF013929
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148930441|gb|EE284947.2|EE284947
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGG-TTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|32835480|gb|CD975158.1|CD975158
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTEST: gi|148986522|gb|EE030276.2|EE030276
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148941059|gb|EC885918.2|EC885918
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|28987578|gb|CB351704.1|CB351704
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148940274|gb|EC885053.2|EC885053
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|211087536|gb|FL161883.1|FL161883
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|149102256|gb|EE287643.2|EE287643
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148940455|gb|EC885254.2|EC885254
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|32833938|gb|CD973616.1|CD973616
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTAEST: gi|148981623|gb|EE027766.2|EE027766
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTA
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|26457221|gb|CA828804.1|CA828804
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|149078548|gb|EE167330.2|EE167330
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|211087533|gb|FL161880.1|FL161880
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCC-TAATACGGATGATGCCAAATATEST: gi|211087537|gb|FL161884.1|FL161884
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148933068|gb|EE285985.2|EE285985
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|67042393|gb|CO468648.1|CO468648
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|149004352|gb|EE039050.2|EE039050
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148933233|gb|EC876884.2|EC876884
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148943018|gb|EC888066.2|EC888066
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|148952264|gb|EC898073.2|EC898073
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|60401248|gb|DN234055.1|DN234055
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|149077295|gb|EE165971.2|EE165971
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|211087539|gb|FL161886.1|FL161886
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGATTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCNAATATEST: gi|21390185|gb|BQ528234.1|BQ528234
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAEST: gi|148968071|gb|EE019406.2|EE019406
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCA
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|149040621|gb|EE046862.2|EE046862
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATEST: gi|149107887|gb|EE292247.2|EE292247
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAG GTGGCAAGGGGGACAAAGATCATAAACCCTEST: gi|211087532|gb|FL161879.1|FL161879
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCT
EST: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAA GTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
genomic: GGGATTTGGTTTCAGATAAACAGATGATGCAAGAAGAACAACCGTTACAAgtatattaaa ... ctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATAT
ggtttcaattttacatgtgctagtgcattaataacttctctttctctttctgcagGTGGCAAGGTGTACAAAGATCATAAGCCCTAATACGGATGATGCCAAATATGTTATAAATGTAAAACAAATCGCAAAA
taataac putative branch site (score: 427)
taacttctctttctct CT-rich tract
attaataactt TA-rich tract