1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatgaaattctgaactttctgatttttttttggttcgtccaatgactgtcatttgtcaattcagtttgacccttcttcgtttgggttttcaccatgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGGGTTGTATGATGTCCAAGGTCCGATTCCACTTGTGAAAAATGTTTTTAT
species | Zea mays |
transcript | GRMZM2G106140_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAG CTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGEST: gi|71299986|gb|DR786057.1|DR786057
genomic: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAGgtatgaaatt ... catgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
EST: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAG CTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGEST: gi|149101985|gb|EE287489.2|EE287489
genomic: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAGgtatgaaatt ... catgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
EST: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAG CTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGEST: gi|94478604|gb|EB707562.1|EB707562
genomic: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAGgtatgaaatt ... catgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
EST: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAG CTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGEST: gi|149102475|gb|EE287839.2|EE287839
genomic: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAGgtatgaaatt ... catgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
EST: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAG CTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGEST: gi|148942821|gb|EC887855.2|EC887855
genomic: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAGgtatgaaatt ... catgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
EST: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAG CTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGEST: gi|149070989|gb|EE159394.2|EE159394
genomic: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAGgtatgaaatt ... catgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
EST: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAG CTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGEST: gi|148982071|gb|EE028112.2|EE028112
genomic: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAGgtatgaaatt ... catgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
EST: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAG CTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
genomic: TGAAGAGTTCCTTGAACTTATCAAGAGTGCACTTCTTGCGGCCCTAGAAGgtatgaaatt ... catgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTG
gtcatttgtcaattcagtttgacccttcttcgtttgggttttcaccatgcaacagCTCTTATTCCGGGCTCCTTATTTGGGCTTATGACATTCAGCCACAAGATTGGGTTGTATGATGTCCAAGGTCCGATTCCACTTGTGAAAAATGTTTTTAT
gtttgac putative branch site (score: 57)
ttttcacc putative PPT