Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtattttctctaatttttgatttctaatgccacctctacctgtatatttagattcctagagttacaattgtgcatatggtaacttttgaaacagttacaatgttttaatgtgaagatgatatgcttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT

Basic information

species Zea mays
transcript GRMZM2G102471_T05
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G102471_T05 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os04g57220.1 (Oryza sativa), 3'ss of exon 3
gtattttctctaatttttgatttctaatgccacctctacctgtatatttaga--ttcctagagttacaattgtgcatatggtaacttttgaaacagttacaatgttttaatgtgaagatgatatgcttatctgc-agGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT--
                                     || ||  |  || |   | || |  |  |  ||| |        |   || |  |   |  ||  ||  |   | |  | || ||   ||||| ||| |||| |||||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||||| || ||||||||||||||||||||  | || ||  
------------------------------------aacatgagttcttgggggtccccaaggacaacattttttgctctctgtattcttcacttgg-actctgactctgtatatatattatgatcttatttgccagGTCTCTTTCCGCACCAAGGTTTTCCACCCGAACATTAATAGCAATGGCAGCATTTGCCTCGACATCCTCAAGGAACAGTGGAGTCCTGCACTTACCATAT

upper sequence: GRMZM2G102471_T05 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA16G17800.1 (Glycine max), 3'ss of exon 2
gtattttctctaatttttgatttctaatgccacctctacctgtatatttagattcctagagttacaattgtgcatatggtaacttttgaaacagttacaatgttttaatgtgaagat-gatatgcttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT--
                      || || |  | | | || |    |  |  |||    |||||       |||  ||  |||  ||  |    ||   |||| ||   | |||   | | |||  || | |  |||| || |||||||| |||||||||||||| ||||||||||| || || || || ||||||||||| || || || || |||||| ||||| | || ||  
---------------------ctccaacgttaac-caacataagcaactgcatt---ggagtt-------tgctcataataa--ttacaccttgtgggaatggtt-ggtatgacattcgttatcattttgttaagGTTTCATTCCGCACAAAGGTTTTCCACCCTAACATCAACAGTAATGGAAGTATCTGCCTTGACATCCTAAAAGAGCAATGGAGTGCTGCTCTGACAATAT

upper sequence: GRMZM2G102471_T05 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA16G17740.1 (Glycine max), 3'ss of exon 2
gtattttctctaatttttgatttctaatgccacctctacctgtatatttagattcctagagttacaattgtgcatatggtaacttttgaaacagttacaatgttttaatgtgaagatgat-atgcttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT--
                      || || |  | | | || |   ||  |  |||    |||||       |||  ||   ||  ||  |    ||   |||| |||  | |||   | || ||  || | |  |||| || || || || |||||||||||||| ||||||||||| || || || || ||||||||||| || || || || |||||  ||| | |||| ||  
---------------------ctccaacgttaac-caacataagtaactgcatt---ggagtt-------tgctaataacaa--ttacaccttgtgggaatggtttg-tatgacattcattatcattttgttaagGTTTCATTTCGTACAAAGGTTTTCCACCCTAACATCAACAGTAATGGAAGTATCTGCCTTGACATCCTCAAAGAGCAATGGAGCGCTGTTCTAACAATAT

upper sequence: GRMZM2G102471_T05 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA10G18310.1 (Glycine max), 3'ss of exon 3
gtattttctctaatttttgatttctaatgccacctctacctgtatatttagattcctagagttacaattgtgcatatggtaacttt---tgaaacagtta-----caatgttt---taatgtgaagatgatatgcttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT--
                                          |||||| |||  || | |||     ||||||||||| || ||||   ||||   ||         | ||||    |||||    || || ||  | | || |||| || ||||| |||||||| || ||||| ||||| |||||||| || || || || || |||||||| || || ||||||||||||||  | ||  |  
------------------------------------------tatattgaga--cccaaagtattttttgtgcatatgttatctttggttgaatatgtcggtagtttaggtttgggcaatgtatttataatgtggct-tttgtagGTTTCCTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTT

upper sequence: GRMZM2G102471_T05 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA16G17760.1 (Glycine max), 3'ss of exon 2
gtattttctctaatttttgatttctaatgccacctctacctgtatatttagattcctagagttacaattgtgcatatggtaacttttgaaacagttacaatgttttaatgtgaagatgatatgcttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT--
                      || || |  | | | || |   ||  |  |||    |||||       |||  ||  |||  ||  |    ||   |||| ||| |     |   | |||  || | |  |||| || |||||||| ||||||||||| || ||||||||||| || || || || ||||||||||| || || || || |||||  ||||| |||| ||  
---------------------ctccaacgttaac-caacataagtaactgcatt---ggagtt-------tgctcataataa--ttacaccttgtgggaatgctttgaatgacattcgttattattttgttaagGTTTCATTCCGCACAAAGGTTTTCCATCCTAACATCAACAGTAATGGAAGTATCTGCCTTGACATCCTCAAAGAGCAATGGAGCGCTGCTCTAACAATAT

upper sequence: GRMZM2G102471_T05 (Zea mays), 3'ss of exon 3
lower sequence: AT5G56150.2 (Arabidopsis thaliana), 3'ss of exon 3
-------gtattttctctaatttttgatttctaatgccacctctacctgtatatttagattcctagagttacaattgtgcatatggtaacttttgaaacagttacaatgttttaatgtgaagatgatatgcttatc-tgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT--
          |||| | |  ||| | || | || |       ||   || || | |  || |  |   |||  ||| |  | |  ||      | ||  ||      |||   |||   ||  |    || ||||  |||||||  | ||||| ||||||||||  ||||| ||||||||||| || || || || || ||||||||||| || || |||||||| |||||  | ||  |  
gtaacagaagttttttgttttttgttatgtttatttgtgtagcttaatgaatttgttcatccacaccattatgatt-tagagagagtgttcaatcaagtaggctttttgtggcaata--aaccttcattgtttatgatgcagGTTGCCTTCCGGACCAAGGTTTATCACCCAAACATCAACAGTAATGGAAGTATCTGTCTTGACATTCTGAAAGAGCAGTGGAGCCCTGCACTTACCGTAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211235968|gb|FL033340.1|FL033340
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211238219|gb|FL033365.1|FL033365
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211242685|gb|FL033392.1|FL033392
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211251624|gb|FL033454.1|FL033454
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343325|gb|FL033497.1|FL033497
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211238220|gb|FL033366.1|FL033366
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|32801264|gb|CD953500.1|CD953500
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211340926|gb|FL033476.1|FL033476
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211235970|gb|FL033342.1|FL033342
EST:     CTTGGTGAACATTCACTTCCCACCGGATTACCCTTTNCA-GCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAAACATCA-CAGCAACGGCAG
genomic: CTTGGTGAACATTCACTTCCCACCGGATTACCCTTT-CAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAA-CATCAACAGCAACGGCAG
EST: gi|211244919|gb|FL033406.1|FL033406
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211247162|gb|FL033427.1|FL033427
EST:     TCTTGGNGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGNCTTTCCGCACCAAGGTTTTCCACCCGAANATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211251618|gb|FL033448.1|FL033448
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343326|gb|FL033498.1|FL033498
EST:     TNTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211338539|gb|FL033471.1|FL033471
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|8367043|gb|BE049988.1|BE049988
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211062662|gb|FL033335.1|FL033335
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343318|gb|FL033490.1|FL033490
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCANAG                         GTGTCTTTCCGCACCAAGGTTTT
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTT
EST: gi|211343322|gb|FL033494.1|FL033494
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|32802365|gb|CD954601.1|CD954601
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|8367395|gb|BE050340.1|BE050340
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|87152240|gb|DY397029.1|DY397029
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCC
EST: gi|211062665|gb|FL033338.1|FL033338
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211338541|gb|FL033473.1|FL033473
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211338533|gb|FL033465.1|FL033465
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAARGTTTTCCACCCGAACATCAACAGCAACGGCAGS
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211249388|gb|FL033433.1|FL033433
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTAHCCTTTCAAGCCACCAAAG                         GTGTCCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAG
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTC-TTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAG
EST: gi|32801414|gb|CD953650.1|CD953650
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|32803451|gb|CD955687.1|CD955687
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211240460|gb|FL033382.1|FL033382
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211340931|gb|FL033481.1|FL033481
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|32803890|gb|CD956126.1|CD956126
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211240462|gb|FL033384.1|FL033384
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343332|gb|FL033504.1|FL033504
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211240450|gb|FL033372.1|FL033372
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211235972|gb|FL033344.1|FL033344
EST:     TCTTGGTGAACATTCACTTCCCASCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211240448|gb|FL033370.1|FL033370
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211244927|gb|FL033414.1|FL033414
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211345710|gb|FL033505.1|FL033505
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|32798360|gb|CD950596.1|CD950596
EST:     TCTTGGTGAACATTCACTTCC-ACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|32823799|gb|CD963521.1|CD963521
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211249398|gb|FL033443.1|FL033443
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGNACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211340929|gb|FL033479.1|FL033479
EST:     CTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAGAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAG
genomic: CTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCA-AAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAG
EST: gi|211249393|gb|FL033438.1|FL033438
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACC-TTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCNACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|31628504|gb|CD526640.1|CD526640
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343330|gb|FL033502.1|FL033502
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAWG                         GTGTCCTTTCCGCACCAAGGTTT-CCACCCGAACATCAACAGCAACGGCAG
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTC-TTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAG
EST: gi|211338540|gb|FL033472.1|FL033472
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCC--ACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211238218|gb|FL033364.1|FL033364
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211242690|gb|FL033397.1|FL033397
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211251615|gb|FL033445.1|FL033445
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343321|gb|FL033493.1|FL033493
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211249395|gb|FL033440.1|FL033440
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211240454|gb|FL033376.1|FL033376
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCWACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|113685262|gb|DW838623.1|DW838623
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|31628261|gb|CD526521.1|CD526521
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211247156|gb|FL033421.1|FL033421
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211338538|gb|FL033470.1|FL033470
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343319|gb|FL033491.1|FL033491
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343323|gb|FL033495.1|FL033495
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211238213|gb|FL033359.1|FL033359
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343328|gb|FL033500.1|FL033500
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|18963462|gb|BM660448.1|BM660448
EST:     TCTTGGTGAACATTCACTTCCC-CCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGC
EST: gi|9794732|gb|BE553040.1|BE553040
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343320|gb|FL033492.1|FL033492
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GNGTCTTTCCGCACCAAGGGTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211251623|gb|FL033453.1|FL033453
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|32802630|gb|CD954866.1|CD954866
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211235976|gb|FL033348.1|FL033348
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTBCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211235974|gb|FL033346.1|FL033346
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGNNGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|18649183|gb|BM498002.1|BM498002
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGGTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|28987119|gb|CB351473.1|CB351473
EST:     CTTGGTGTAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: CTTGGTG-AACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211340933|gb|FL033483.1|FL033483
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGG
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGG
EST: gi|211249387|gb|FL033432.1|FL033432
EST:     TCTTGGTGAACATTCACTTCNCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTNTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211240455|gb|FL033377.1|FL033377
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211238217|gb|FL033363.1|FL033363
EST:     CTTGGTGAANATTCACTTCCCACCGGATTACCCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAAGGTTTT
genomic: CTTGGTGAACATTCACTTCCCACCGGATTACCC-TTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAA-GGTTTT
EST: gi|211240451|gb|FL033373.1|FL033373
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211340927|gb|FL033477.1|FL033477
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211340928|gb|FL033478.1|FL033478
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211343331|gb|FL033503.1|FL033503
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211251617|gb|FL033447.1|FL033447
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCG
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCG
EST: gi|211242679|gb|FL033386.1|FL033386
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|30591287|gb|CD052297.1|CD052297
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211338542|gb|FL033474.1|FL033474
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211340935|gb|FL033485.1|FL033485
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211240458|gb|FL033380.1|FL033380
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211247159|gb|FL033424.1|FL033424
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211244914|gb|FL033401.1|FL033401
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211249390|gb|FL033435.1|FL033435
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAAGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211247163|gb|FL033428.1|FL033428
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211238210|gb|FL033356.1|FL033356
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAG
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGT-CTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAG
EST: gi|20300917|gb|BQ163860.1|BQ163860
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAG
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAG
EST: gi|211240456|gb|FL033378.1|FL033378
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211238214|gb|FL033360.1|FL033360
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
EST: gi|211247151|gb|FL033416.1|FL033416
EST:     TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAG                         GTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC
genomic: TCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2313

GCAAGCGACCATCATGGGGCCTTCGGACAGCCCATTTGCAGGTGGGGTATTCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2139

GCAAGCGACCATCATGGGGCCTTCGGACAGCCCATTTGCAGGTGGGGTATTCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1897

GCAAGCGACCATCATGGGGCCTTCGGACAGCCCATTTGCAGGTGGGGTATTCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2119

GCAAGCGACCATCATGGGGCCTTCGGACAGCCCATTTGCAGGTGGGGTATTCTTGGTGAACATTCACTTCCCACCGGATTACCCTTTCAAGCCACCAAAGgtattttctc ... ttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

taacttttgaaacagttacaatgttttaatgtgaagatgatatgcttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT
                                            cttatct  CT-rich tract
               ttacaatgttttaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtattttctctaatttttgatttctaatgccacctctacctgtatatttagattcctagagttacaattgtgcatatggtaacttttgaaacagttacaatgttttaatgtgaagatgatatgcttatctgcagGTGTCTTTCCGCACCAAGGTTTTCCACCCGAACATCAACAGCAACGGCAGCATTTGCCTTGACATTCTTAAGGAACAGTGGAGTCCTGCTTTAACTAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG