Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
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 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tggttgaaattcaaatagtaacaatgtggggtctcagttatcctgctctattagcttgtgagtttcctgtagttatggtttatgatggctcgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACCATTAAGTATCTTCGAGTTCCTGATGAG

Basic information

species Zea mays
transcript GRMZM2G038606_T01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G038606_T02 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os01g15310.1 (Oryza sativa), 3'ss of exon 3
tggttgaaattcaaatagtaacaatgtggggtctcagttatcctgctctattagcttgtga-gtttcctgtagttatggtttatgatggctcgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACCATTAAGTATCTTCGAGTTCCTGATGAG
 |  |    |        |       |  |||  || ||    || ||  |||| |||||| |  | ||||  |  |  ||  | |||| |   ||||||||| ||||| |||||||||||||||||||| |||||||| || ||||||||||| ||||||||||| ||||||||||||
cgaattgtgtgttctcttttgggtcatttggttccaattggtttgatcgtttagtttgtgatgaatgctgtt-tcctcattgtttatggttgtcattgcagGATGGTGATAAGTTTTGGAGGATGCCAGAATGTTACATCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAG

upper sequence: GRMZM2G038606_T02 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA10G02380.1 (Glycine max), 3'ss of exon 3
----tggttgaaattcaa-atagtaacaatgtggggtctcagttatcctgctctattagcttgtgagtttcctgtagttatggtttatgat----ggctcgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACCATTAAGTATCTTCGAGTTCCTGATGAG
     | |     ||||   |  |  |    |    |||||| |||  |  |||  ||   ||   || |  |  |  | |   |||  ||       | | | | ||||| || || |  |||||| | ||||| ||||| ||||||||||| || ||||| ||||| ||||| ||||||||||||
gtaacgatcttttttcactgttctccctgcattcactctcagatattgtcttctcata-tgtgaatgtctgttacaact-taacttacaatttgaaattggcaattcagGATGGAGATAGATTTTGGCGTATGCCCGAGTGCTACATTCGCGGCAATACCATAAAGTACCTTCGGGTTCCTGATGAG

upper sequence: GRMZM2G038606_T02 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA02G17430.2 (Glycine max), 3'ss of exon 3
----tggttgaaattcaa-atagtaacaatgtggggtctcagttatcctgctctattagcttgtgagtttcctgtagttatggtttatgat----ggctcgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACCATTAAGTATCTTCGAGTTCCTGATGAG
     | |     ||||      |  |    |    |||||| |||  |  |||  | |  ||   ||||  ||    | |   |||  |        | | | | ||||| || || |  |||||| | ||||| ||||| |||||||| || || ||||||||||| ||||| ||||||||||||
gtaacgatcttttttcactgctctccctgcattcaatctcagatattgtcttctcat-gtgtgaatgtttgttgctact-taacttacaacttgaaattggcaattcagGATGGAGATAGATTTTGGCGTATGCCTGAGTGCTACATTCGTGGCAATACCATTAAGTACCTTCGGGTTCCTGATGAG

upper sequence: GRMZM2G038606_T02 (Zea mays), 3'ss of exon 3
lower sequence: AT5G27720.1 (Arabidopsis thaliana), 3'ss of exon 4
----tggttgaaattcaaatagtaacaatgtggggtctcagttatcctgctctattagcttgtgagtttcctgtagttatggtttatgatggctcga--attgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACCATTAAGTATCTTCGAGTTCCTGATGAG
    |  |     |||| ||  | | |          |   |||  || |   || |  || || ||  |    | | ||   || || || || ||  | |  ||||||| || |  |||||||||||||| || ||||| || || || ||||| || ||||| ||||||||||| ||||||
gttatcttatgttttcatatgttgatacaaatatactttgtttagacttcgtgatgaaattttgtgtagctgacactcatatattttgctg-cttgattactctagGACGGAGATAGATTTTGGAGGATGCCGGAATGTTATATCCGTGGTAACACAATCAAGTACCTTCGAGTTCCGGATGAG

upper sequence: GRMZM2G038606_T02 (Zea mays), 3'ss of exon 3
lower sequence: Vv07s0005g00230.t01 (Vitis vinifera), 3'ss of exon 5
-tggttgaaattcaaatagtaacaatgtggggtctcagttatcctgctctattagcttgtgagtttcctgtagttat---ggtttatgatggctcgaatt----gcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACCATTAAGTATCTTCGAGTTCCTGATGAG
 |  |  |   |  |||  | ||  |    | |    ||| | || ||   ||| ||||  ||||     | | | |     || ||| |   ||  |||    | |||| || || | ||||||||| ||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||||
gtaatcaactctttaat--tgactgttcttgtttgttgtt-tacttcttatttaccttgacagttcttgtttgctcttcaaattcatgtttcatccgatttaatgtagGATGGAGATAGGTTTTGGAGAATGCCTGAGTGCTACATCCGTGGGAATACAATTAAATATCTTCGAGTTCCTGATGAG

upper sequence: GRMZM2G038606_T02 (Zea mays), 3'ss of exon 3
lower sequence: Vv14s0060g02240.t01 (Vitis vinifera), 3'ss of exon 3
---tggt-tgaaattcaaatagtaacaatgtggggt-ctcagttatcctgctctattagcttgtga-----gtttcctgtagttatggtttatgatggc--tcgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACCATTAAGTATCTTCGAGTTCCTGATGAG
   |||| |    |||||  | | |     |    | ||    | |  |  | || |  |||   |      | | ||||  ||   | | |  ||||   |  || || |||| || || | ||||||||| |||||||| || |||||||| ||||| || |||||||||||  |||| ||||| |||
gtatggtatttctttcaatcaattatgtcttatttttctttaatttatttttataatgacttaaaatgatcatcttctgtgattcatggtcacaatgggaattaaaatgtagGATGGAGATAGGTTTTGGAGAATGCCAGAATGCTACATTCGTGGGAATACAATTAAGTATCTCAGAGTCCCTGACGAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211074698|gb|FL076203.1|FL076203
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533726|gb|FL071650.1|FL071650
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGYTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211536731|gb|FL071660.1|FL071660
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGT-ACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533729|gb|FL071653.1|FL071653
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077444|gb|FL076220.1|FL076220
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077445|gb|FL076221.1|FL076221
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077443|gb|FL076219.1|FL076219
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|78107776|gb|DV526194.1|DV526194
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077441|gb|FL076217.1|FL076217
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211536732|gb|FL071661.1|FL071661
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|78026896|gb|DV495283.1|DV495283
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|94474355|gb|EB703313.1|EB703313
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533731|gb|FL071655.1|FL071655
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|32868742|gb|CF008424.1|CF008424
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211074704|gb|FL076209.1|FL076209
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211074701|gb|FL076206.1|FL076206
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|31358015|gb|CD442372.1|CD442372
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533734|gb|FL071658.1|FL071658
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533732|gb|FL071656.1|FL071656
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|5343007|gb|AI795312.1|AI795312
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|89252869|gb|DY624655.1|DY624655
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077437|gb|FL076213.1|FL076213
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|32804245|gb|CD956481.1|CD956481
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|84970052|gb|DW468427.1|DW468427
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077438|gb|FL076214.1|FL076214
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077436|gb|FL076212.1|FL076212
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533730|gb|FL071654.1|FL071654
EST:     CGACACGTGGATGAACATCCATCCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: CGACACGTGGATGAACATCCATC-TTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211074703|gb|FL076208.1|FL076208
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|12969926|gb|BG266727.1|BG266727
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211536733|gb|FL071662.1|FL071662
EST:     GCGACACGTGGATGAACATCAATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533727|gb|FL071651.1|FL071651
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211074702|gb|FL076207.1|FL076207
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|78115516|gb|DV533904.1|DV533904
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533728|gb|FL071652.1|FL071652
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211536730|gb|FL071659.1|FL071659
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211533733|gb|FL071657.1|FL071657
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077434|gb|FL076210.1|FL076210
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|32827249|gb|CD966927.1|CD966927
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211074700|gb|FL076205.1|FL076205
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|9952507|gb|BE639090.1|BE639090
EST:     GCGACACGTGGATGAACATCCATCTTANGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211077442|gb|FL076218.1|FL076218
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|78115517|gb|DV533905.1|DV533905
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|211536735|gb|FL071664.1|FL071664
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC
EST: gi|76927712|gb|DV171333.1|DV171333
EST:     GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAG                         GACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTTGCGGGAACACC
genomic: GCGACACGTGGATGAACATCCATCTTAGGGAGGTTATTTGCACCTCAAAGgtgaaaaatc ... cgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctctattagcttgtgagtttcctgtagttatggtttatgatggctcgaattgcagGACGGTGACAAGTTTTGGAGGATGCCAGAGTGTTACATTCGCGGGAACACCATTAAGTATCTTCGAGTTCCTGATGAG
                                 tttatgat  TA-rich tract