1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtcagtattgtgtcagaactagtacacctatactcatgttccattttccatttcagaaacttcacactgatgaccaatttatacatgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTTGTCATGTCAACTGATCTTTTCTCCGACCGCGTCAAGGGACCTATTACA
species | Zea mays |
transcript | GRMZM2G016184_T02 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|211179443|gb|FL364371.1|FL364371
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|211370346|gb|FL342982.1|FL342982
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAAACAATAG GGGTATGTCCAGCGCTCATGCEST: gi|211430478|gb|FL350076.1|FL350076
genomic: AGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAA-CAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGC
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|44681921|gb|CK786969.1|CK786969
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|76293603|gb|DV033171.1|DV033171
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|211134109|gb|FL315814.1|FL315814
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|148947020|gb|EC892317.2|EC892317
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|76286797|gb|DV026365.1|DV026365
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|211200884|gb|FL351309.1|FL351309
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|148947019|gb|EC892316.2|EC892316
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AGGGGTTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|50322746|gb|CO517872.1|CO517872
genomic: A-GGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|50338098|gb|CO533224.1|CO533224
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|148953653|gb|EC899012.2|EC899012
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|67017667|gb|CO446416.1|CO446416
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAA-ACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|211176856|gb|FL323774.1|FL323774
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTEST: gi|76280960|gb|DV020528.1|DV020528
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
EST: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAG GGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
genomic: AAGGGCTACACTTTACTGACAAAAATACAGCGCATCGAATGGAACAATAGgtcagtattg ... atgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCT
tccattttccatttcagaaacttcacactgatgaccaatttatacatgtttttagGGGTATGTCCAGCGCTCATGCAATTTTTATCACGGCTGTATCATTATATCTTGTCATGTCAACTGATCTTTTCTCCGACCGCGTCAAGGGACCTATTACA
cactgat putative branch site (score: 243)
tgttttt putative PPT
aatttatacatgtttt TA-rich tract