1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
gtttgtgaccaagatattttttggttggatttatgaactttttaggtatctctaacatggtcacaatcatccttgctgcagTCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAACAGCTTTCGTCTGTCTCTGATCTTACATTGCAGAATGGACCATTGTCAT
species | Zea mays |
transcript | GRMZM2G475867_T01 |
intron # | 21 |
splice site | 3' |
intron type | U2 |
EST: CATATAGCATTACTCTACAG TCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAAEST: gi|71760706|gb|DR958643.1|DR958643
genomic: CATATAGCATTACTCTACAGgtttgtgacc ... cttgctgcagTCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAA
EST: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAG TCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAAEST: gi|78024464|gb|DV492851.1|DV492851
genomic: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAGgtttgtgacc ... cttgctgcagTCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAA
EST: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAG TCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAAEST: gi|12969124|gb|BG266069.1|BG266069
genomic: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAGgtttgtgacc ... cttgctgcagTCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAA
EST: TTTGCGATTGTGGAAAGCATATAGCATTACTCTACAG TCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAAEST: gi|5018261|gb|AI714454.1|AI714454
genomic: TTTGCGATTGTGGAAAGCATATAGCATTACTCTACAGgtttgtgacc ... cttgctgcagTCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAA
EST: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAG TCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAAEST: gi|9952965|gb|BE639548.1|BE639548
genomic: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAGgtttgtgacc ... cttgctgcagTCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAA
EST: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAG TCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAAEST: gi|9952966|gb|BE639549.1|BE639549
genomic: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAGgtttgtgacc ... cttgctgcagTCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAA
EST: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAG TCACATGATGTATTCAGGGAA
genomic: TCTTTCAGCATGATTTGCGATTGTGGAAAGCATATAGCATTACTCTACAGgtttgtgacc ... cttgctgcagTCACATGATGTATTCAGGGAA
ggatttatgaactttttaggtatctctaacatggtcacaatcatccttgctgcagTCACATGATGTATTCAGGGAATATCTTGACCTTCTTAATATCTTGGAGGAACAGCTTTCGTCTGTCTCTGATCTTACATTGCAGAATGGACCATTGTCAT
ctctaac putative branch site (score: 7)
tcatcctt putative PPT
aacttttta TA-rich tract