1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtgcagtgcttatatatacccatcatctatttttggagttaacagatatgaagtttgtattatgtctgttgtattataaccattttgtaatagttcatttagtttgctcgaaattctttgcacagGGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCTGTACATTCTAGCTCCCTCTTTGTTGGACGTGAAATTCGCAGTGAAAAG
species | Zea mays |
transcript | GRMZM2G124151_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGACACCAGGTTCATTGCCTTTTGAGAAGTTGTGGGAGGAATTTTTACAG GGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCTEST: gi|149089528|gb|EE178775.2|EE178775
genomic: TGACACCAGGTTCATTGCCTTTTGAGAAGTTGTGGGAGGAATTTTTACAGgtgcagtgct ... ctttgcacagGGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCT
EST: TGACACCAGGTTCATTGCCTTTTGAGAAGTTGTGGGAGGAATTTTTACAG GGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCTEST: gi|149077297|gb|EE165973.2|EE165973
genomic: TGACACCAGGTTCATTGCCTTTTGAGAAGTTGTGGGAGGAATTTTTACAGgtgcagtgct ... ctttgcacagGGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCT
EST: TGACACCAGGTTCATTGCCTTTTGAGAAGTTGTGGGAGGAATTTTTACAG GGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCTEST: gi|71437254|gb|DR818304.1|DR818304
genomic: TGACACCAGGTTCATTGCCTTTTGAGAAGTTGTGGGAGGAATTTTTACAGgtgcagtgct ... ctttgcacagGGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCT
EST: TGACACCAGGTTCATTGCCTTTTGAGAAGTTGTGGGAGGAATTTTTACAG GGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCT
genomic: TGACACCAGGTTCATTGCCTTTTGAGAAGTTGTGGGAGGAATTTTTACAGgtgcagtgct ... ctttgcacagGGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCT
gtattataaccattttgtaatagttcatttagtttgctcgaaattctttgcacagGGTCATGATGGTCGATATTCCATCTATATCCATGCATCTCGTGAAATACCTGTACATTCTAGCTCCCTCTTTGTTGGACGTGAAATTCGCAGTGAAAAG
ttataac putative branch site (score: 34)
ttctttgc putative PPT
attttgtaatagtt TA-rich tract