1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...tttgcagttatgactcatgatacaagggcctggtatactcagacattttttcacttagtttgacaaattataacagtattgaccgttagcactgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGG
species | Zea mays |
transcript | GRMZM2G121820_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|17929723|gb|BM266689.1|BM266689
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: CCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|71763196|gb|DR961133.1|DR961133
genomic: CCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|91874179|gb|EB404136.1|EB404136
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|26557278|gb|CA829513.1|CA829513
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|71766703|gb|DR964640.1|DR964640
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|60358579|gb|DN225552.1|DN225552
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|15188221|gb|BI417198.1|BI417198
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGTTTCAATCCCTTCTGAGCTTGGCAEST: gi|30087058|gb|CB885266.1|CB885266
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGG-AACAATCCCTTCTGAGCTTGGCA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|21809925|gb|BQ668243.1|BQ668243
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|22819416|gb|BU499506.1|BU499506
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|30032043|gb|CB833894.1|CB833894
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|5895619|gb|AW036865.1|AW036865
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: GGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|60394754|gb|DN227624.1|DN227624
genomic: GGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|148972291|gb|EE023193.2|EE023193
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|31612157|gb|CD568779.1|CD568779
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|211244696|gb|FL479034.1|FL479034
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: CTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|16137383|gb|BI894248.1|BI894248
genomic: CTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|22545940|gb|BU098299.1|BU098299
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: CTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|91873861|gb|EB403818.1|EB403818
genomic: CTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|22819407|gb|BU499497.1|BU499497
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|30306876|gb|CD001549.1|CD001549
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|109637591|gb|EC591136.1|EC591136
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|15177611|gb|BI398550.1|BI398550
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGTATCAATCCCTTCTGAGCTTGGCAEST: gi|71436702|gb|DR817752.1|DR817752
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGG-AACAATCCCTTCTGAGCTTGGCA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|78089347|gb|DV517721.1|DV517721
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|211082646|gb|FL412210.1|FL412210
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAGTCCCTTCTGAGCTTGGCAAEST: gi|148941830|gb|EC886803.2|EC886803
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|76012011|gb|DT939181.1|DT939181
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|4885819|gb|AI676939.1|AI676939
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: GGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|26559721|gb|CA831956.1|CA831956
genomic: GGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|9733712|gb|BE512464.1|BE512464
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|22545450|gb|BU097809.1|BU097809
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAGCCTTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|60349397|gb|DN216370.1|DN216370
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|148933347|gb|EC877009.2|EC877009
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|15177610|gb|BI398549.1|BI398549
genomic: TGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|28909789|gb|CB331101.1|CB331101
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|148933348|gb|EC877010.2|EC877010
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|149000066|gb|EE037172.2|EE037172
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|60396509|gb|DN229378.1|DN229378
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|149095177|gb|EE180794.2|EE180794
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|101383854|gb|EB813982.1|EB813982
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|15323606|gb|BI478890.1|BI478890
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|30306664|gb|CD001337.1|CD001337
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GG-ACTTTTATAAGAATACCATTCAAGGAACAATCCCTTCTGAGCTTGGCAEST: gi|22549219|gb|BU101420.1|BU101420
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAAC-TTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCA
EST: CTGG-GCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|15323607|gb|BI478891.1|BI478891
genomic: CTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|30088202|gb|CB886407.1|CB886407
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAACCTGGAGCATCTTCAGTATCT GGACCTTTATAAGAATACCATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|149000067|gb|EE037173.2|EE037173
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|37373616|gb|CF623115.1|CF623115
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|18659525|gb|BM500384.1|BM500384
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|149000533|gb|EE037716.2|EE037716
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|78077979|gb|DV506396.1|DV506396
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|37396731|gb|CF635659.1|CF635659
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGTAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|71766702|gb|DR964639.1|DR964639
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTGGGGAAACGGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|78077978|gb|DV506395.1|DV506395
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|22521623|gb|BU080434.1|BU080434
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: GGTCATCTGG-GCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|60348625|gb|DN215598.1|DN215598
genomic: GGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|22546266|gb|BU098577.1|BU098577
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: CTGG-GCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|78089348|gb|DV517722.1|DV517722
genomic: CTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|31997810|gb|CD661783.1|CD661783
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|71448904|gb|DR829954.1|DR829954
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|30031710|gb|CB833561.1|CB833561
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|71319607|gb|DR796562.1|DR796562
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|71758054|gb|DR955991.1|DR955991
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: AGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|60398400|gb|DN231216.1|DN231216
genomic: AGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|14243408|gb|BG841108.2|BG841108
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGAAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|29576741|gb|CB616853.1|CB616853
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|148994954|gb|EE034307.2|EE034307
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|40334004|gb|CK368074.1|CK368074
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|37388668|gb|CF631545.1|CF631545
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTGGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAAEST: gi|37381290|gb|CF627520.1|CF627520
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
EST: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCT GGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
genomic: TCTGGTCATCTGGTGCCTGAGCTTGGGAAACTGGAGCATCTTCAGTATCTgtaagttctt ... actgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAA
ttttttcacttagtttgacaaattataacagtattgaccgttagcactgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGG
tattgac putative branch site (score: 606)
aaattataacagtatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tttgcagttatgactcatgatacaagggcctggtatactcagacattttttcacttagtttgacaaattataacagtattgaccgttagcactgaaacagGGAACTTTATAAGAATAACATTCAAGGAACAATCCCTTCTGAGCTTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- tgcagtt
- - - - - - - - - - - - - ggcctgg