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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcgtgcgcggtgatctcgttctccctctaccttccttttgattccggagttgatgccgcctggtggcgaatcggctgacgggctctgcctcgtttcgcgcattcggcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA

Basic information

species Zea mays
transcript GRMZM2G121262_T01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G121262_T01 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os05g46270.1 (Oryza sativa), 3'ss of exon 1
-------------gtgcgtgcgcggtgatctcgttctccctctaccttccttttgattccg-gagttgatgccgcctg-gtggcgaatcggctgacgggctct-gcctcgtttc---gcgcattcggcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA
             | | | | |  |      ||| |||  ||    ||      | |   | | ||||  || |  |  | |||  ||  | ||| ||| | | | |||| ||    |||  ||     |   |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||
gtgagcgcgggagggggggggggtgccgcgccgtcctcgttcggatttgtgaccggtggtgtgggttgtagctgtttttgcggccgattcg-tgatgggttttcgtctcgattttgtgcgggtttttttttgttagGGTTTGACGAAGCTTTTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGGCGCATTGCCGTCGACGCCAGCATGA

upper sequence: GRMZM2G121262_T01 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA20G22190.3 (Glycine max), 3'ss of exon 1
gtgcgtgcgcggtgatctcgttctccctctaccttccttttgattccggagttgatgccgcctggtggcgaatcggctgacgggctctgcctcgtttcgcgcattcggcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA
        | | | || |  |  ||   ||| |    ||||         ||| ||    | || |    | | || | | |    | |  |  ||||                |||||||| || || ||  ||||||||||||| || ||| | ||||||||| | || ||||||||||||||||| ||||| |||||| | ||||| |||||||
--------gtgttcattttttcatcaacctatccctatttttccctttcggtttattattcttgatattaattaggttaatg----ccgattattttc----------------tagGGTTTAACAAAGCTTTTGGCGGACAATGCCCCGAAGTCCATGAAGGAGAACAAATTCGAGAGCTACTTCGGTCGCAAGATCGCCATTGACGCTAGCATGA

upper sequence: GRMZM2G121262_T01 (Zea mays), 3'ss of exon 2
lower sequence: GLYMA10G28200.2 (Glycine max), 3'ss of exon 1
gtgcgtgcgcggtgatctcgttctccctctaccttccttttgattccggagttgatgccgcctggtggcgaatcggctgacgggctctgcctcgtttcgcgcattcggcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA
        | | | |  |  |   |   ||| |   || ||  |     |  | ||    |  | |    | |  | | | |    | |  |  |||                 |||||||| || || ||  | ||||||||||| || ||| | ||||||||| | || |||||||||||||| || ||||| |||||  | ||||| |||||||
--------gtgttcactttttcaccatcctatccctctatttctctttcaaattatcattctcgatattaattatgttaatg----ccgattgttttt----------------tagGGTTTAACAAAGCTTTTAGCGGACAATGCCCCGAAGTCCATGAAGGAGAACAAATTCGAGAGCTACTTTGGTCGCAAGATCGCTATTGACGCTAGCATGA

upper sequence: GRMZM2G121262_T01 (Zea mays), 3'ss of exon 2
lower sequence: Vv14s0060g00210.t01 (Vitis vinifera), 3'ss of exon 1
gtgcgtgcgcggtgatctcgttctccctctaccttcc--ttttgattccggagttgatgccgcctggtggcgaatcggctgacgggctctgcctcgtttcgcgcattcggcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA
                   || | | || | | ||||    |  ||  | ||| |  |    |  |||      ||     | |   ||| | |  | |  | | |  |       |||||||| ||||| || ||||| |||||||| || ||||| ||||| |||||||| |||||||||| ||||||||||||||||||| | || ||||||||||
-------------------gtacactct-tgcattccaacatcaatgtctgagattttatt-ctaggtt-----tcattaaaagtcttcttctttttgttcctcttgtgctactgctagGGTTTAACGAAGCTTCTGGCTGACAATGCCCCAAAGGCCATGAAAGAGCAGAAATTCGAGAGCTTCTTCGGCCGCAAAATCGCCATAGATGCCAGCATGA

upper sequence: GRMZM2G121262_T01 (Zea mays), 3'ss of exon 2
lower sequence: PP1S456_8V6.1 (Physcomitrella patens), 3'ss of exon 1
--------------------------------------------gtgcgtgcgcggtg-atctcgttctccctctaccttcctt-----ttgattccggagttgatgccgcctggtggcgaatcggctgacgggctctgcctcgtttcgc----gcattcggcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA
                                            |||  |    | |  | ||||   ||  | |||| | | |     ||||||    |  |||    | |  ||   ||    |  |   |   | |  |  |||       | ||||   || |  |||| |||||||| ||||| ||||||||||| ||  |  ||||||| ||||| || || ||||||||||| || || ||||| ||  |||| ||||||||||
gtgaggagatctagtctgcgttgctcgctttttgttgcgattccgtggctttttgtttcacctcgccttctttttacccttcctccaggttgattttttaagtgagttaggcatgtaaggatggagtcgtatgatacagagtttttttaatgtagaattc--tgtttacagGGGTTGACGAAGCTGCTAGCGGACAATGCACCTGATTCGATGAAAGAGCAAAAATTTGAGAGCTACTTTGGTCGAAAAATAGCTATCGATGCCAGCATGA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211167737|gb|FL381616.1|FL381616
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|88749646|gb|DY533787.1|DY533787
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211100122|gb|FL400844.1|FL400844
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211223590|gb|FL394143.1|FL394143
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAKNNGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211425800|gb|FL370226.1|FL370226
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211174986|gb|FL426224.1|FL426224
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|28568845|gb|CB280720.1|CB280720
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|148983038|gb|EE028944.2|EE028944
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211012301|gb|FL429470.1|FL429470
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAANGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|26558947|gb|CA831182.1|CA831182
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|30087247|gb|CB885455.1|CB885455
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211017547|gb|FL416072.1|FL416072
EST:     GCCGCCG-CCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211373800|gb|FL383593.1|FL383593
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211381883|gb|FL378666.1|FL378666
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211207489|gb|FL412293.1|FL412293
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|50328745|gb|CO523871.1|CO523871
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|148945123|gb|EC890320.2|EC890320
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211150723|gb|FL424954.1|FL424954
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|5566733|gb|AI881599.1|AI881599
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|148985935|gb|EE029848.2|EE029848
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211393754|gb|FK982163.1|FK982163
EST:     GCCGCCGCCCGCCACCCGCCACAGCNGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|89763728|gb|DY690807.1|DY690807
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|22473079|gb|BU037559.1|BU037559
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATC-AG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211042507|gb|FL401127.1|FL401127
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211212604|gb|FL411845.1|FL411845
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211025441|gb|FL424759.1|FL424759
EST:     GCCGCCGCCCKCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|31405508|gb|CD484240.1|CD484240
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCACACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211153107|gb|FL147726.1|FL147726
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211245220|gb|FL396976.1|FL396976
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211330557|gb|FL419745.1|FL419745
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|87156101|gb|DY400890.1|DY400890
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211437408|gb|FL427299.1|FL427299
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|71444731|gb|DR825781.1|DR825781
EST:     CGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: CGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211159822|gb|FL401300.1|FL401300
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGTAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211154932|gb|FL392729.1|FL392729
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211350574|gb|FL379660.1|FL379660
EST:     G-CGCCGCCCGCCACCCGCCACAGCCGCCGCAKRCGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211063788|gb|FL421781.1|FL421781
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211299165|gb|FL411033.1|FL411033
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|74235361|gb|DT643275.1|DT643275
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211428990|gb|FL402811.1|FL402811
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211017548|gb|FL416073.1|FL416073
EST:     CCGCCGCCCGCCACCCGCCACAGCCGCCGCAGTACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: CCGCCGCCCGCCACCCGCCACAGCCGCCGCAG-ACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211500136|gb|FL426014.1|FL426014
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|9952839|gb|BE639422.1|BE639422
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211027563|gb|FL411213.1|FL411213
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211501768|gb|FL386313.1|FL386313
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGTAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211210052|gb|FL412299.1|FL412299
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211431955|gb|FL418480.1|FL418480
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211212177|gb|FL397460.1|FL397460
EST:     GCSSCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211413681|gb|FL415020.1|FL415020
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211269215|gb|FL410577.1|FL410577
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211149118|gb|FL417449.1|FL417449
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|93014006|gb|EB639526.1|EB639526
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211245266|gb|FL399179.1|FL399179
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211496668|gb|FL401564.1|FL401564
EST:     CCGCCGCCCGCCACCCGCCACAGCCGGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: CCGCCGCCCGCCACCCGCCACAGCC-GCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211467040|gb|FL427724.1|FL427724
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGTAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|76018920|gb|DT946090.1|DT946090
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|32907157|gb|CF011970.1|CF011970
EST:     CGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: CGCCGCCCGCCACCCGCCACAGCCGCCGCAGAC--GAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|91054792|gb|EB165210.1|EB165210
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211073425|gb|FL369872.1|FL369872
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCSGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211518748|gb|FL408140.1|FL408140
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211145693|gb|FL374594.1|FL374594
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211095527|gb|FL420438.1|FL420438
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211541786|gb|FL372764.1|FL372764
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211017549|gb|FL416074.1|FL416074
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211092307|gb|FL381165.1|FL381165
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
EST: gi|211109386|gb|FL406905.1|FL406905
EST:     GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAG                         GGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG
genomic: GCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 48 (upstream exon), 47 (downstream exon)
Score: 385

ACAAAACGGAAATAGCTCGCGGCCGCGGTTTCTTGCGCCACTCCGGCTCAGCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA


Block sizes: 46 (upstream exon), 44 (downstream exon)
Score: 77

ACAAAACGGAAATAGCTCGCGGCCGCGGTTTCTTGCGCCACTCCGGCTCAGCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA


Block sizes: 49 (upstream exon), 47 (downstream exon)
Score: 106

ACAAAACGGAAATAGCTCGCGGCCGCGGTTTCTTGCGCCACTCCGGCTCAGCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA


Block sizes: 46 (upstream exon), 47 (downstream exon)
Score: 68

ACAAAACGGAAATAGCTCGCGGCCGCGGTTTCTTGCGCCACTCCGGCTCAGCCGCCGCCCGCCACCCGCCACAGCCGCCGCAGACGAGATGGGCATCAAGgtgcgtgcgc ... gcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggtggcgaatcggctgacgggctctgcctcgtttcgcgcattcggcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA
            ggctgac  putative branch site (score: 68)
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgcgtgcgcggtgatctcgttctccctctaccttccttttgattccggagttgatgccgcctggtggcgaatcggctgacgggctctgcctcgtttcgcgcattcggcgtgtgtagGGTTTGACGAAACTGCTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGCAAAATCGCCGTCGACGCCAGCATGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCT