1 5' 3' | 2 5' 3' |
...ctattcattgattaatatgatgactgatgccaaaagctattatgattttcttatgacacttgtgaacatacttctaacatgttcacctgtactttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCTCTGATAAGGCGTCTGCTTGGTGCTGTACAATCTGTGTGTACACATAAG
species | Zea mays |
transcript | GRMZM2G025470_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACA--- AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|211410514|gb|FL261735.1|FL261735
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATEST: gi|109179560|gb|EC380070.1|EC380070
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAAT
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|13126514|gb|BG317084.1|BG317084
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|211407976|gb|FL261730.1|FL261730
genomic: AATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACA--- AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|13126515|gb|BG317085.1|BG317085
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|32921127|gb|CF025939.1|CF025939
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGACCTCCACAAGCTGACAAAAACA--- AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|32914897|gb|CF019709.1|CF019709
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGACCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|32851133|gb|CD990814.1|CD990814
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGACCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|211407973|gb|FL261727.1|FL261727
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACA--- AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|18178381|gb|BM379591.1|BM379591
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|32851050|gb|CD990731.1|CD990731
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGGGCGACCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|16377623|gb|BI992025.1|BI992025
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|32845497|gb|CD985178.1|CD985178
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGACCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|78117275|gb|DV535662.1|DV535662
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACA--- AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|211410522|gb|FL261743.1|FL261743
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCEST: gi|14203827|gb|BG837504.1|BG837504
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
EST: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTG AGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
genomic: AATTACAATGCATGTGGTAGTGCGGCCTCCACAAGCTGACAAAAACAGTGgtattgccga ... actttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTC
ttttcttatgacacttgtgaacatacttctaacatgttcacctgtactttcccagAGAAGCAGCTTGCCAATTCCCCCAAGCAGAACAGATGTGGATGCACCATTCTCTGATAAGGCGTCTGCTTGGTGCTGTACAATCTGTGTGTACACATAAG
ttctaac putative branch site (score: 82)
tactttccc putative PPT