1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtatgtttcttatgtgttttacttgggctggagcaagcaagatctacagggtttagtttgatcgtctatttcgtttaccaacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAAAACCGACCGAGAACAGCAATAAGCTAGCTACAAATCGGGTCCCAGCCCG
species | Zea mays |
transcript | GRMZM2G178822_T01 |
intron # | 17 |
splice site | 3' |
intron type | U2 |
EST: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAAEST: gi|60356611|gb|DN223584.1|DN223584
genomic: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
EST: AAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAAEST: gi|67015254|gb|CO444003.1|CO444003
genomic: AAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
EST: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCAACGCAGAAGAGTACAAEST: gi|67022700|gb|CO451449.1|CO451449
genomic: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
EST: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCAACGCAGAAGAGTACAAEST: gi|67018282|gb|CO447031.1|CO447031
genomic: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
EST: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCAACGCAGAAGAGTACAAEST: gi|71311110|gb|DR791868.1|DR791868
genomic: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
EST: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAAEST: gi|28188021|gb|CB179631.1|CB179631
genomic: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
EST: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAAEST: gi|6269998|gb|AW157969.1|AW157969
genomic: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
EST: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCAACGCAGAAGAGTACAAEST: gi|24768245|gb|CA403374.1|CA403374
genomic: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
EST: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTG GTGTACAAAGAAAACTTCACTTGGATCGTCAGCCAACGCAGAAGAGTACAA
genomic: GAAATCTCATAGCAATGCACCTGCAAAATCAAACGGTTTATCTAGGACTGgtatgtttct ... aacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAA
aagcaagatctacagggtttagtttgatcgtctatttcgtttaccaacattacagGTGTACAAAGAAAACTTCACTTGGATCGTCAGCCACCGCAGAAGAGTACAAAACCGACCGAGAACAGCAATAAGCTAGCTACAAATCGGGTCCCAGCCCG
gtttgat putative branch site (score: 191)
tttagttt TA-rich tract