1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gttagttaacagactagtattttgctttgtacctaattcatttaggatattgttgttttacatatgctttggttcatttgttgtagTTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCGGGACTCTATCTACGATGAAATCTCATAGCAATGCACCTGCAAAATCAAA
species | Zea mays |
transcript | GRMZM2G178822_T01 |
intron # | 16 |
splice site | 3' |
intron type | U2 |
EST: GCTTCCTGTCCGTCGGAAATCTTCATCGCTTCCTAAAACACCTCCATGTG TTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCGEST: gi|67022700|gb|CO451449.1|CO451449
genomic: GCTTCCTGTCCGTCGGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTGgttagttaac ... tttgttgtagTTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCG
EST: GCTTCCTGTCCGTCGGAAATCTTCATCGCTTCCTAAAACACCTCCATGTG TTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCGEST: gi|60352824|gb|DN219797.1|DN219797
genomic: GCTTCCTGTCCGTCGGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTGgttagttaac ... tttgttgtagTTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCG
EST: GCTTCCTGTCCGTCGGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTG TTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTEST: gi|71311110|gb|DR791868.1|DR791868
genomic: GCTTCCTGTCCGTCGGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTGgttagttaac ... tttgttgtagTTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCT
EST: GCTTCCTGTCCGTCGGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTG TTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCGEST: gi|28188021|gb|CB179631.1|CB179631
genomic: GCTTCCTGTCCGTCGGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTGgttagttaac ... tttgttgtagTTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCG
EST: GCTTCCTGTCCGTCTGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTG TTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCGEST: gi|6269998|gb|AW157969.1|AW157969
genomic: GCTTCCTGTCCGTCGGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTGgttagttaac ... tttgttgtagTTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCG
EST: CTGGCCTGTCCGTCGGAAATCTTCATCGCTTCCTAAAACACCTCCATGTG TTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCG
genomic: CT-TCCTGTCCGTCGGAAAGCTTCATCGCTTCCTAAAACACCTCCATGTGgttagttaac ... tttgttgtagTTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCG
cctaattcatttaggatattgttgttttacatatgctttggttcatttgttgtagTTGGATCAAAGAGAATTTCCGAGAACAGTGTTGCTAGAAGATTCTCGACCGGGACTCTATCTACGATGAAATCTCATAGCAATGCACCTGCAAAATCAAA
acctaat putative branch site (score: 212)
ttcattt putative PPT
atattgttgtttta TA-rich tract