1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaatttatttatgctaatacttttttgtgattcacatgtatcactatcactttctgcactaattttcttccaaaaaagattgacagttgctactgttgttgctgacatgattttctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATCCCACCTGTGGTTAGAGTCGGAAATCATCGCTGGTTCTAGTAGCAACGT
species | Zea mays |
transcript | GRMZM2G099328_T01 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: CTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|31364007|gb|CD448362.1|CD448362
genomic: CTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: CCATCAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|44900705|gb|CK827250.1|CK827250
genomic: CCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTTTATEST: gi|31363998|gb|CD448353.1|CD448353
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: GCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|76910058|gb|DV163680.1|DV163680
genomic: GCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|14203375|gb|BG837052.1|BG837052
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|32859029|gb|CD998710.1|CD998710
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTTTATEST: gi|71773668|gb|DR971565.1|DR971565
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTTGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTTTATEST: gi|211535560|gb|FL475981.1|FL475981
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTCCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|31362847|gb|CD447204.1|CD447204
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
ccaaaaaagattgacagttgctactgttgttgctgacatgattttctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATCCCACCTGTGGTTAGAGTCGGAAATCATCGCTGGTTCTAGTAGCAACGT
tgctgac putative branch site (score: 2)
tgattttctcttttt CT-rich tract
attttctcttttta TA-rich tract