1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...ccattgatttatccgcatgtgtgttgatttctacactatttgtattcatcttataccaaatctggtctgattgactgtttgcattttcttttctttttagTAACTTTGGAGTACCAGTGATGCAAAGGGACACTAGCTCTAGCGATGTTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG
species | Zea mays |
transcript | GRMZM5G825110_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTCCCGGTCCCCCCTCCGGAGCCACCCTCCCCTTCTCCGGGACCTTGAG TAACTTTGGAGTACCAGTGATGCAAAGGGACACTAGCTCTAGCGATGTTTCEST: gi|78079230|gb|DV507642.1|DV507642
genomic: TCTCCCGGTCCCCCCTCCGGAGCCACCCTCCCCTTCTCCGGGACCTTGAGgtatttccgt ... ttctttttagTAACTTTGGAGTACCAGTGATGCAAAGGGACACTAGCTCTAGCGATGTTTC
EST: TCTCCCGGTCCCCCCTCCGGAGCCACCCTCCCCTTCTCCGGGACCTTGAG TAACTTTGGAGTACCAGTGATGCAAAGGGACACTAGCTCTAGCGATGTTTCEST: gi|76021501|gb|DT948671.1|DT948671
genomic: TCTCCCGGTCCCCCCTCCGGAGCCACCCTCCCCTTCTCCGGGACCTTGAGgtatttccgt ... ttctttttagTAACTTTGGAGTACCAGTGATGCAAAGGGACACTAGCTCTAGCGATGTTTC
EST: TCTCCCGGTCCCCCCTCCGGAGCCACCCTCCCCTTCTCCGGGACCTTGAG TAACTTTGGAGTACCAGTGATGCAAAGGGACACTAGCTCTAGCGATGTTTC
genomic: TCTCCCGGTCCCCCCTCCGGAGCCACCCTCCCCTTCTCCGGGACCTTGAGgtatttccgt ... ttctttttagTAACTTTGGAGTACCAGTGATGCAAAGGGACACTAGCTCTAGCGATGTTTC
tcatcttataccaaatctggtctgattgactgtttgcattttcttttctttttagTAACTTTGGAGTACCAGTGATGCAAAGGGACACTAGCTCTAGCGATGTTTCTGCTTCTCATGTAGGGCGTGTAAGACGTCGCAAACATCCATCTGAG
gattgac putative branch site (score: 116)
ctgtttgcattttctt CT-rich tract
attttcttttcttttt TA-rich tract