1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...ttttttttaaagtgatggtgtgcatgttgctttgctttgttgagctaatccattacaggtgtagtatacatgtatcatgcctacagaccttttgttgcagCGAGAATTCAGACTGCTGCGCGCCTTCATCCCCTTCCCGGCGGCCGACGTCCAACTCCGCCTCACAGTGCTTCTGTGGTTCTGCCTAGCGCCTGCTCCTG
species | Zea mays |
transcript | GRMZM2G164175_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTCGACGCGACGCCGCTGGCCACTCGACGGAGTCGGCGCCTCAGTCACAG CGAGAATTCAGACTGCTGCGCGCCTTCATCCCCTTCCCGGCGGCCGACGTCEST: gi|88748601|gb|DY532742.1|DY532742
genomic: CTCGACGCGACGCCGCTGGCCACTCGACGGAGTCGGCGCCTCAGTCACAGgtcagcggtc ... tttgttgcagCGAGAATTCAGACTGCTGCGCGCCTTCATCCCCTTCCCGGCGGCCGACGTC
EST: CTCGACGCGACGCCGCTGGCCACTCGACGGAGTCGGCCCCTCACTCACAG CGAGAATTCAAAGTGCTGCGCGCCTTCATCCCCTTCCCGGGGGCCGACGTC
genomic: CTCGACGCGACGCCGCTGGCCACTCGACGGAGTCGGCGCCTCAGTCACAGgtcagcggtc ... tttgttgcagCGAGAATTCAGACTGCTGCGCGCCTTCATCCCCTTCCCGGCGGCCGACGTC
taatccattacaggtgtagtatacatgtatcatgcctacagaccttttgttgcagCGAGAATTCAGACTGCTGCGCGCCTTCATCCCCTTCCCGGCGGCCGACGTCCAACTCCGCCTCACAGTGCTTCTGTGGTTCTGCCTAGCGCCTGCTCCTG
agctaat putative branch site (score: 3)
ccttttgtt putative PPT
tagtata TA-rich tract