1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtttctgtcctctcccttcgcctttctcttcccgccatctctgccgtcccctaactttctttccgcgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTGCCTTACGGGGCTAATCCGCGGCGCGGGATTTGGTCGATCAG
species | Zea mays |
transcript | GRMZM2G121456_T03 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCACATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|149081623|gb|EE170768.2|EE170768
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|211481382|gb|FL023994.1|FL023994
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGA-GTGCGGTEST: gi|78092088|gb|DV520462.1|DV520462
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|211481381|gb|FL023993.1|FL023993
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACTCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACNGCCGTAGCCGGAGGTGCGGTEST: gi|19821991|gb|BQ048015.1|BQ048015
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|71436538|gb|DR817588.1|DR817588
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|101401421|gb|EB822388.1|EB822388
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAAGAGGTGCGCTCGTGCCGTAACTACCGCCEST: gi|148939986|gb|EC884717.2|EC884717
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCC
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|61119391|gb|DN560352.1|DN560352
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|211478511|gb|FL023987.1|FL023987
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|32913968|gb|CF018780.1|CF018780
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|149088221|gb|EE177331.2|EE177331
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|101399114|gb|EB821430.1|EB821430
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|78111070|gb|DV529467.1|DV529467
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|76919121|gb|DV167599.1|DV167599
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|71427481|gb|DR808531.1|DR808531
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|71445134|gb|DR826184.1|DR826184
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|74245787|gb|DT653701.1|DT653701
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|78090189|gb|DV518563.1|DV518563
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|148938546|gb|EC882867.2|EC882867
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|19822147|gb|BQ048171.1|BQ048171
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|50338176|gb|CO533302.1|CO533302
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|101400189|gb|EB821914.1|EB821914
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|93282145|gb|EB674409.1|EB674409
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|76012850|gb|DT940020.1|DT940020
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|86472628|gb|DY238998.1|DY238998
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTACCCGGAGGTGCGGTEST: gi|211478510|gb|FL023986.1|FL023986
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|93282646|gb|EB674910.1|EB674910
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|148934818|gb|EC878864.2|EC878864
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|101399344|gb|EB821545.1|EB821545
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|71307773|gb|DR790105.1|DR790105
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|211478514|gb|FL023990.1|FL023990
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTEST: gi|26455779|gb|CA827362.1|CA827362
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
EST: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAG GAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
genomic: CGCCCGAACCCCAATACCAACCCTGCTCCCAGATCTCTCCAACTCCTCAGgtttctgtcc ... cgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGT
cctttctcttcccgccatctctgccgtcccctaactttctttccgcgtcttgcagGAGCAGGAGGTGCGCTCGTGCCGTAACTACCGCCGTAGCCGGAGGTGCGGTGCCTTACGGGGCTAATCCGCGGCGCGGGATTTGGTCGATCAG
ccctaac putative branch site (score: 2)
ctttctttccgcgtct CT-rich tract
taacttt TA-rich tract