1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ataggaaaattttgattgacattgttattgaaaatgctgttagtcactaagctcattgctgggagttatttttcttaataaatttggtttcctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTGGTGGTGTTGTTCGAACTGTCACT
species | Vitis vinifera |
transcript | Vv11s0065g00320.t01 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351031738|gb|FQ459995.1|FQ459995
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351021488|gb|FQ446032.1|FQ446032
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|110731755|gb|EE106442.1|EE106442
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|352794354|gb|FQ481585.1|FQ481585
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|110385861|gb|EC950417.1|EC950417
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349822011|gb|FQ408340.1|FQ408340
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351026847|gb|FQ436500.1|FQ436500
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351025243|gb|FQ433660.1|FQ433660
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351045391|gb|FQ447656.1|FQ447656
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351041115|gb|FQ444092.1|FQ444092
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351022613|gb|FQ447135.1|FQ447135
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351040449|gb|FQ434582.1|FQ434582
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTGTTGCTCGAGATGGTGCAAGTEST: gi|349809487|gb|FQ414377.1|FQ414377
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGGAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349824245|gb|FQ417632.1|FQ417632
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|30304313|gb|CB981107.1|CB981107
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTCCAAGTEST: gi|351016593|gb|FQ424020.1|FQ424020
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|110689479|gb|EE065738.1|EE065738
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|352786908|gb|FQ481283.1|FQ481283
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351043726|gb|FQ431079.1|FQ431079
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351025600|gb|FQ426614.1|FQ426614
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351025823|gb|FQ427835.1|FQ427835
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351038974|gb|FQ457649.1|FQ457649
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351018428|gb|FQ439240.1|FQ439240
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351036694|gb|FQ457407.1|FQ457407
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGGAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351031403|gb|FQ445428.1|FQ445428
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAANGATGAGGCTGAA AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCAAGATGGTGCAAGTEST: gi|351029736|gb|FQ427576.1|FQ427576
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351032941|gb|FQ461830.1|FQ461830
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349829562|gb|FQ420094.1|FQ420094
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351051948|gb|FQ450639.1|FQ450639
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351024691|gb|FQ433106.1|FQ433106
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351017168|gb|FQ424595.1|FQ424595
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351017430|gb|FQ435783.1|FQ435783
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351017804|gb|FQ436157.1|FQ436157
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349827569|gb|FQ422437.1|FQ422437
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|156725857|gb|EV229968.1|EV229968
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCCCGAGATGGTGCAAGTEST: gi|351037015|gb|FQ460725.1|FQ460725
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGGAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|110699436|gb|EE076435.1|EE076435
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|352786494|gb|FQ479103.1|FQ479103
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGAATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|28968773|gb|CB347806.1|CB347806
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349824515|gb|FQ413182.1|FQ413182
genomic: GACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351053908|gb|FQ441674.1|FQ441674
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349825823|gb|FQ423118.1|FQ423118
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|352790114|gb|FQ481313.1|FQ481313
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351055242|gb|FQ440581.1|FQ440581
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGGTCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349809005|gb|FQ407454.1|FQ407454
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCCGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349813553|gb|FQ413787.1|FQ413787
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|110697799|gb|EE075191.1|EE075191
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351024243|gb|FQ423666.1|FQ423666
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349814982|gb|FQ410205.1|FQ410205
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGCGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|161715904|gb|FC065505.1|FC065505
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351031621|gb|FQ459878.1|FQ459878
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|30304254|gb|CB981048.1|CB981048
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAGGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGGTCGAGATGGTGCAAGTEST: gi|351013648|gb|FQ429789.1|FQ429789
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGGAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|71888991|gb|DT038046.1|DT038046
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGEST: gi|351021529|gb|FQ446073.1|FQ446073
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTG
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|161719520|gb|FC066431.1|FC066431
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|110382788|gb|EC947109.1|EC947109
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349812407|gb|FQ406428.1|FQ406428
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGCGCAAGTEST: gi|349810332|gb|FQ401778.1|FQ401778
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|351043642|gb|FQ451573.1|FQ451573
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349830158|gb|FQ420418.1|FQ420418
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|34544506|gb|CF512738.1|CF512738
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTCCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTEST: gi|349824484|gb|FQ413151.1|FQ413151
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGGAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTACTATTGCTCGAGATGGTGCAAGTEST: gi|71874115|gb|DT023170.1|DT023170
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
actaagctcattgctgggagttatttttcttaataaatttggtttcctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTGGTGGTGTTGTTCGAACTGTCACT
tcctaat putative branch site (score: 2)
tttcct CT-rich tract
agttatttttcttaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ataggaaaattttgattgacattgttattgaaaatgctgttagtcactaagctcattgctgggagttatttttcttaataaatttggtttcctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGTGGTGGTGTTGTTCGAACTGTCACT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- -ggaaaat
- - - - - - - - - - - - - - -gaaaatg
- - - - - - - - - - - - - - - - - - ctgttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgctgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aataaat