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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatccactatatatgtatatattattatcataattatctggtcatttaaaatatttgtctggttgttctctcttgctttggaggactggtttcctcaacactatccagATATGGTTGGATGGCGCACATCCTCTATTCGTAGGGAGACAGAACTTGTTAAG

Basic information

species Vitis vinifera
transcript Vv10s0003g01230.t01
intron # 6
splice site 3'
intron type U12 (go to U12 genes for details)

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22011609|gb|BQ796643.1|BQ796643
EST:     TCTGGGCGCATTTAGCTGTCGCATTCTTTATGCTAATGTCTCTTACGATC                         ATATGGTTGGATGGCGCACGTCCTCTATTCGTAGGGAGACAGAACTTGTTA
genomic: TCTGGGCGCATTTAGCTGTCGCATTCTTTATGCTAATGTCTCTTACGATCgtatccacta ... cactatccagATATGGTTGGATGGCGCACATCCTCTATTCGTAGGGAGACAGAACTTGTTA