1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaataatttggcagttctctttctaacttaatatcaccagatttcattaccttattggtggtaagcagttggatattggatatagaagtaagcttttttccctaaccacctttattttcttttgctttatgttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
species | Vitis vinifera |
transcript | Vv12s0057g01240.t01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|351031552|gb|FQ459809.1|FQ459809
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAEST: gi|351031792|gb|FQ460049.1|FQ460049
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAA
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATAEST: gi|351033918|gb|FQ462973.1|FQ462973
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATA
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGEST: gi|110421432|gb|EC987728.1|EC987728
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|349821059|gb|FQ404312.1|FQ404312
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGA-GTATTTTAAG GGAAACTTTGAEST: gi|110687718|gb|EE065446.1|EE065446
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGA
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGTAAATCTGGAGTTGATACGAAATGCCGGAAGTAA-GEST: gi|352795534|gb|FQ480122.1|FQ480122
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGA-GTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|352789729|gb|FQ478544.1|FQ478544
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAAGT-GATACGAAAEST: gi|110697753|gb|EE075019.1|EE075019
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGA-GTTGATACGAAA
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|351053257|gb|FQ459125.1|FQ459125
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|351045623|gb|FQ440808.1|FQ440808
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATEST: gi|110691072|gb|EE068758.1|EE068758
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAAT
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|352798538|gb|FQ480563.1|FQ480563
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|351046111|gb|FQ442489.1|FQ442489
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGG-AGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAATGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACAAAATGCCGGAGTAAAGEST: gi|351054706|gb|FQ462736.1|FQ462736
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAATATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAEST: gi|110724707|gb|EE100769.1|EE100769
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGA
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAAGCTT-GAAAATCTGGGAGT-GATACGAAATGCCCGAGTAAAGEST: gi|110709662|gb|EE085318.1|EE085318
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAA-GCTTTGAAAATCTGG-AGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|351044450|gb|FQ442981.1|FQ442981
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACEST: gi|161713572|gb|FC063401.1|FC063401
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATAC
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|351057250|gb|FQ450957.1|FQ450957
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGAAGCTTTGAAAATEST: gi|351036912|gb|FQ459434.1|FQ459434
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAAT
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTCTAAG GGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAGEST: gi|351031889|gb|FQ460146.1|FQ460146
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
EST: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAG GGATGCTTTGAAAATCTGGAGTTGA
genomic: AAGGTGGAGCAGCTTGTCTTAGTGTTTTGACTGATGAGAAGTATTTTAAGgtaataattt ... gttattcaagGGAAGCTTTGAAAATCTGGAGTTGA
aagtaagcttttttccctaaccacctttattttcttttgctttatgttattcaagGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGTAAAG
ccctaac putative branch site (score: 2)
tttattttctttt TA-rich tract