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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tttttttatctgtgcctgtatggctttgatttaggatgtgctttagctggaatggtgataaatttgtgtaagaatcttaacaatgaattgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT

Basic information

species Vitis vinifera
transcript Vv19s0015g01190.t01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA08G35600.1 (Glycine max), 3'ss of exon 2
tttttttatctgtgcctgtatggct--ttgatttaggatgtgct--ttagctgga-atggtgataaatttgtgtaagaatcttaacaatgaattgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT
 ||  || |  |  ||   ||      |||   | |  | ||||  | |  |  |  | |||  ||   | |||| ||   |||  |    |||  ||  ||   ||||| ||| | |||||||| || ||||| ||||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||||||||||||||
cttgattttaagaaccaacataagcaattgcactggagtttgctcataaattacacgttgtgggaatgctttgtatgacatttattatc--attttgttaag-

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA10G18310.1 (Glycine max), 3'ss of exon 3
tttttttatctgtgcctgtatggctttgatttaggatgt--gctttagctgga-atggtgataaatttg-tgtaagaatcttaacaatgaattgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT
    | |||     ||   |    |||   |    ||||   |||| | || | |||  | ||  || | | |  | |   ||   || |  ||  |   | ||||||||||| |||| ||||| || ||||| ||||| ||||||||||| || ||||| || || || ||||||||||||||||| |||||||| ||| | |
----tatattgagacccaaagtattttttgtgcatatgttatctttggttgaatatgtcggtagtttaggtttgggcaatgtatttataatgtggcttttgtagGTTTCCTTCCGAACCAAGGTATTTCACCCTAACATAAACAGCAATGGAAGTATCTGTCTGGACATTCTGAAAGAGCAGTGGAGTCCTGCCCTTACAGTTT

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA16G17760.1 (Glycine max), 3'ss of exon 2
tttttttatctgtgcctgtatggctttgatttaggatgtgctttagctggaatggtgataaatttgtgtaagaatcttaacaatga-----attgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT
   |   |  |   ||   ||   |   |  |    ||   |||      |||  | | |  ||   | ||   | | ||  |        |||   | |   ||||||| ||| | |||||||| ||||| || ||||| ||||| ||||| || ||||||||||| ||||| |||||||| |||||| |||| || |||||||
--ctccaacgttaaccaacataagt---aactgcattggagtttgctcataataattacaccttgtgggaatgctttgaatgacattcgttattattttgttaagGTTTCATTCCGCACAAAGGTTTTCCATCCTAACATCAACAGTAATGGAAGTATCTGCCTTGACATCCTCAAAGAGCAATGGAGCGCTGCTCTAACAATAT

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA16G17800.1 (Glycine max), 3'ss of exon 2
tttttttatctgtgcctgtatggctttgatttaggatgtgctttagctggaatggtgataaatttgtgtaagaatct---taacaatga--attgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT
   |   |  |   ||   ||       |  |    ||   |||      |||  | | |  ||   | ||   |     | ||| |    ||    | |   ||||||| ||| | |||||||| |||||||| ||||| ||||| ||||| || ||||||||||| ||||| |||||||| |||||  |||| || |||||||
--ctccaacgttaaccaacataagc---aactgcattggagtttgctcataataattacaccttgtgggaatggttggtatgacattcgttatcattttgttaagGTTTCATTCCGCACAAAGGTTTTCCACCCTAACATCAACAGTAATGGAAGTATCTGCCTTGACATCCTAAAAGAGCAATGGAGTGCTGCTCTGACAATAT

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA16G17740.1 (Glycine max), 3'ss of exon 2
tttttttatctgtgcctgtatggctttgatttaggatgtgctttagctggaatggtgataaatttgtgtaagaatct---taacaatga--attgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT
   |   |  |   ||   ||   |   |  |    ||   |||      ||   | | |  ||   | ||   | |   | ||| | |  ||    | |   ||||||| ||  | |||||||| |||||||| ||||| ||||| ||||| || ||||||||||| ||||| |||||||| |||||| |||  || |||||||
--ctccaacgttaaccaacataagt---aactgcattggagtttgctaataacaattacaccttgtgggaatggtttgtatgacattcattatcattttgttaagGTTTCATTTCGTACAAAGGTTTTCCACCCTAACATCAACAGTAATGGAAGTATCTGCCTTGACATCCTCAAAGAGCAATGGAGCGCTGTTCTAACAATAT

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: AT5G56150.2 (Arabidopsis thaliana), 3'ss of exon 3
-------------------tttttttatctgtgcctgtatggctt--tgatttaggatgtgct--------ttagctggaatggtgataaatttgtgtaagaatctt--aacaatgaat--------tgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT
                   |||| |||| | |   ||| | ||||  ||| || |    | |         | |  | ||  |    |  | |   ||| |  | ||    |||| ||         |   ||  ||||||| ||||| | || ||||| |  ||||| ||||| ||||| ||||| || ||||| ||||| || ||||||||||||||||||||||| || ||  |||
gtaacagaagttttttgttttttgttatgtttatttgtgtagcttaatgaatttgttcatccacaccattatgatttagagagagtgttcaatcaagtaggctttttgtggcaataaaccttcattgtttatgatgcagGTTGCCTTCCGGACCAAGGTTTATCACCCAAACATCAACAGTAATGGAAGTATCTGTCTTGACATTCTGAAAGAGCAGTGGAGCCCTGCACTTACCGTAT

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: EDO98738 (Chlamydomonas reinhardtii), 3'ss of exon 3
-----------------tttttttatctgtgc--ctgtatggctttgat-ttaggatgtgctttag--ctggaatggtgataaatttgtgtaagaatcttaacaatgaattgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT-----
                  |        || ||  | | | ||| ||  | || || |  ||       || ||  |  |||  |   | |     | |    |   ||  | |     ||   |  | ||| |     |||||| |||||||||| | |||||| | || ||||||||||| || || || ||||| ||||||||||||||||| || || |     
gtaaggctaaacgaacgctgcaaggcttgggcagcgggaaggcctttgtgttggggttcgcaaggagactcgagggcggatggaccagggcttcgaccagctccgcgagcttc--aatgcctttacctttctggttgtagGTGTACCACCCCAACGTGAACAGCCAGGGCAGCATCTGCCTGGACATTCTCAAAGACCAGTGGAGCCCTGCCCTGACCATTTCCAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22010747|gb|BQ795781.1|BQ795781
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|28962130|gb|CB341163.1|CB341163
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCCAGCCACCCAAG                         GTTTCCTTCAGAACAA-GGTGTTCCACCCNAACATTAACAGCAATGGT
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGT
EST: gi|110397347|gb|EC963078.1|EC963078
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71882326|gb|DT031381.1|DT031381
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32457786|gb|CD798960.1|CD798960
EST:     CCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: CCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32461233|gb|CD802407.1|CD802407
EST:     TGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAG
genomic: TGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCA--CCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAG
EST: gi|110397452|gb|EC963192.1|EC963192
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30305733|gb|CB982527.1|CB982527
EST:     TTCTGGCGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|18458569|gb|BM436847.1|BM436847
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30304918|gb|CB981712.1|CB981712
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|28966983|gb|CB346016.1|CB346016
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110377673|gb|EC942753.1|EC942753
EST:     CTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: CTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110424378|gb|EC990737.1|EC990737
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110718424|gb|EE095241.1|EE095241
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30132111|gb|CB917450.1|CB917450
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|22011709|gb|BQ796743.1|BQ796743
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|27586838|gb|CB009533.1|CB009533
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30325577|gb|CD008839.1|CD008839
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|77579270|gb|DV218463.1|DV218463
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAA-G-GTCCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30326464|gb|CD009726.1|CD009726
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110724706|gb|EE100768.1|EE100768
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110716572|gb|EE091681.1|EE091681
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110367321|gb|EC931251.1|EC931251
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|26261823|gb|CA812886.1|CA812886
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|27586209|gb|CB008904.1|CB008904
EST:     CCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: CCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30304847|gb|CB981641.1|CB981641
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|22012426|gb|BQ797460.1|BQ797460
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32457491|gb|CD798665.1|CD798665
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30303600|gb|CB980394.1|CB980394
EST:     TTTTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCCCCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|28969210|gb|CB348243.1|CB348243
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30305660|gb|CB982454.1|CB982454
EST:     TTCTGGCGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110398331|gb|EC964618.1|EC964618
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110357711|gb|EC921395.1|EC921395
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|83274669|gb|DV938765.1|DV938765
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30132272|gb|CB917611.1|CB917611
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GATTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|26256846|gb|CA807909.1|CA807909
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGT-CCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71882028|gb|DT031083.1|DT031083
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32459244|gb|CD800418.1|CD800418
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAGCAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110425028|gb|EC991403.1|EC991403
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|22012427|gb|BQ797461.1|BQ797461
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30125737|gb|CB911076.1|CB911076
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110397772|gb|EC963658.1|EC963658
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|18458592|gb|BM436870.1|BM436870
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|33408306|gb|CF213933.1|CF213933
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32459061|gb|CD800235.1|CD800235
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110717724|gb|EE093841.1|EE093841
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110363395|gb|EC926978.1|EC926978
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32459040|gb|CD800214.1|CD800214
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71888938|gb|DT037993.1|DT037993
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30299508|gb|CB976302.1|CB976302
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110415513|gb|EC981426.1|EC981426
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110732574|gb|EE107981.1|EE107981
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71881592|gb|DT030647.1|DT030647
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32459000|gb|CD800174.1|CD800174
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|26257517|gb|CA808580.1|CA808580
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|27582220|gb|CB004915.1|CB004915
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110379386|gb|EC944575.1|EC944575
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30131459|gb|CB916798.1|CB916798
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|26257247|gb|CA808310.1|CA808310
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|33406943|gb|CF212570.1|CF212570
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|34548951|gb|CF517183.1|CF517183
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|33406857|gb|CF212484.1|CF212484
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71890103|gb|DT039158.1|DT039158
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30300456|gb|CB977250.1|CB977250
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|26261501|gb|CA812564.1|CA812564
EST:     TTCTGGTGTNCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71883658|gb|DT032713.1|DT032713
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|22010748|gb|BQ795782.1|BQ795782
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30299771|gb|CB976565.1|CB976565
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30303661|gb|CB980455.1|CB980455
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110722136|gb|EE098100.1|EE098100
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71883580|gb|DT032635.1|DT032635
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110411130|gb|EC976832.1|EC976832
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30129132|gb|CB914471.1|CB914471
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|28961509|gb|CB340762.1|CB340762
EST:     TTTTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110359545|gb|EC921209.1|EC921209
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|29782648|gb|CB348159.2|CB348159
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32271408|gb|CD720567.1|CD720567
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|22011991|gb|BQ797025.1|BQ797025
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71869064|gb|DT018119.1|DT018119
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110404601|gb|EC969913.1|EC969913
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71886333|gb|DT035388.1|DT035388
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30324284|gb|CD007546.1|CD007546
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32459688|gb|CD800862.1|CD800862
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|29783467|gb|CB349632.2|CB349632
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32459002|gb|CD800176.1|CD800176
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30300176|gb|CB976970.1|CB976970
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110402516|gb|EC960316.1|EC960316
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|34548858|gb|CF517090.1|CF517090
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110689861|gb|EE066456.1|EE066456
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32270308|gb|CD719467.1|CD719467
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110425346|gb|EC991730.1|EC991730
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110723131|gb|EE100089.1|EE100089
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|71890767|gb|DT039822.1|DT039822
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110425426|gb|EC991811.1|EC991811
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110722789|gb|EE099363.1|EE099363
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110362457|gb|EC925993.1|EC925993
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32245378|gb|CD711197.1|CD711197
EST:     CCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: CCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32245796|gb|CD711615.1|CD711615
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|33404254|gb|CF209881.1|CF209881
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110381911|gb|EC937988.1|EC937988
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|22012477|gb|BQ797511.1|BQ797511
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|32270399|gb|CD719558.1|CD719558
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|27581939|gb|CB004634.1|CB004634
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|30327346|gb|CD010608.1|CD010608
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|29783510|gb|CB349712.2|CB349712
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|46910472|gb|CN545847.1|CN545847
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
EST: gi|110721366|gb|EE098284.1|EE098284
EST:     TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAG                         GTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC
genomic: TTCTGGTGTCCATCCACTTCCCACCGGATTACCCATTCAAGCCACCCAAGgtaacagaaa ... cgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gctggaatggtgataaatttgtgtaagaatcttaacaatgaattgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT
                             tcttaac  putative branch site (score: 2)
            ataaatttgtgtaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tttttttatctgtgcctgtatggctttgatttaggatgtgctttagctggaatggtgataaatttgtgtaagaatcttaacaatgaattgcgtggagcagGTTTCCTTCAGAACAAAGGTGTTCCACCCCAACATTAACAGCAATGGTAGCATCTGCCTTGATATCCTGAAAGAGCAGTGGAGCCCTGCCCTCACAATAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG
- - - - - - tgcctgt
- - - - - - - - - - tggcttt
- - - - - - - - - - - - - - - - -ggatgtg
- - - - - - - - - - - - - - - - - - - - - -tagctgg
- - - - - - - - - - - - - - - - - - - - - - - - - - tggtgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caatgaa