1 5' 3' | 2 5' 3' | 3 5' 3' |
...cctgcaattttgaatgtgacatagttttggatgttggtgactttattctattctatttaatttgttgataaaattttaaaatctccatctattgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTTTGCTATCAGCAACTG
species | Vitis vinifera |
transcript | Vv16s0098g01230.t01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110358753|gb|EC923202.1|EC923202
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|29782440|gb|CB347747.2|CB347747
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCGTCCTGGAGGTGATGAAGTTEST: gi|77587975|gb|DV223193.1|DV223193
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110717957|gb|EE094270.1|EE094270
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|71870722|gb|DT019777.1|DT019777
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110689966|gb|EE066652.1|EE066652
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110367767|gb|EC931718.1|EC931718
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|30130798|gb|CB916137.1|CB916137
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCGAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|71881461|gb|DT030516.1|DT030516
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|32267439|gb|CD716402.1|CD716402
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|27586308|gb|CB009003.1|CB009003
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|110425614|gb|EC992003.1|EC992003
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: GCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|30124888|gb|CB910227.1|CB910227
genomic: GCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|26257451|gb|CA808514.1|CA808514
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110386300|gb|EC950883.1|EC950883
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|77584695|gb|DV221422.1|DV221422
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110389944|gb|EC954819.1|EC954819
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110399179|gb|EC965672.1|EC965672
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|71877757|gb|DT026812.1|DT026812
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|37185114|gb|CF604467.1|CF604467
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110399826|gb|EC966356.1|EC966356
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|26267103|gb|CA818166.1|CA818166
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|26258230|gb|CA809293.1|CA809293
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|83276424|gb|DV940432.1|DV940432
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|18458899|gb|BM437177.1|BM437177
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|71877853|gb|DT026908.1|DT026908
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|71866886|gb|DT015941.1|DT015941
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110414524|gb|EC980358.1|EC980358
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|27583746|gb|CB006441.1|CB006441
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|71878990|gb|DT028045.1|DT028045
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|30301030|gb|CB977824.1|CB977824
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110363128|gb|EC926699.1|EC926699
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|32460944|gb|CD802118.1|CD802118
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: GCCAAGCATAATCAGACCAAAGATTGCTGTGGCTGG-TATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|77586272|gb|DV222235.1|DV222235
genomic: GCCAAGCATAATCAGACCAAAGATTGC--TGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110387623|gb|EC952306.1|EC952306
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|30130934|gb|CB916273.1|CB916273
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|110392196|gb|EC957443.1|EC957443
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110383452|gb|EC947825.1|EC947825
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110406623|gb|EC972203.1|EC972203
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110721176|gb|EE097878.1|EE097878
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|51051681|gb|CO819178.1|CO819178
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|71880427|gb|DT029482.1|DT029482
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|32245206|gb|CD711025.1|CD711025
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|30130828|gb|CB916167.1|CB916167
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|32265178|gb|CD716767.1|CD716767
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|30129473|gb|CB914812.1|CB914812
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110387093|gb|EC951736.1|EC951736
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTEST: gi|110716510|gb|EE091556.1|EE091556
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTTEST: gi|18458694|gb|BM436972.1|BM436972
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
ttctattctatttaatttgttgataaaattttaaaatctccatctattgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTTTGCTATCAGCAACTG
tgttgat putative branch site (score: 4)
ttctatttaatttgtt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| cctgcaattttgaatgtgacatagttttggatgttggtgactttattctattctatttaatttgttgataaaattttaaaatctccatctattgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTTTTGCTATCAGCAACTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
cctgcaa
- - - - - -gaatgtg
- - - - - - - - - - - - - - - - gttggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gataaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccatc