1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...agcaagatgtttcatgtccatcattcccatgtaatattgacttctgctgatgacactgttggtgctgttatatgatgacatttgttgtatttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTCAAGAAAGATATAAGGGCAATCAG
species | Vitis vinifera |
transcript | Vv06s0004g04460.t01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351048056|gb|FQ441228.1|FQ441228
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGGCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351038970|gb|FQ457645.1|FQ457645
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349821185|gb|FQ408772.1|FQ408772
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351053570|gb|FQ462645.1|FQ462645
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351035254|gb|FQ458611.1|FQ458611
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349808994|gb|FQ407443.1|FQ407443
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351037204|gb|FQ457037.1|FQ457037
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349809519|gb|FQ414409.1|FQ414409
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: CCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349822872|gb|FQ398259.1|FQ398259
genomic: CCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349824427|gb|FQ417814.1|FQ417814
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349817462|gb|FQ407252.1|FQ407252
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349825681|gb|FQ421780.1|FQ421780
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349815532|gb|FQ400688.1|FQ400688
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349832322|gb|FQ420883.1|FQ420883
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351042878|gb|FQ451172.1|FQ451172
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAGAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349829872|gb|FQ422185.1|FQ422185
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349809169|gb|FQ398942.1|FQ398942
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349815709|gb|FQ400865.1|FQ400865
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351053158|gb|FQ455615.1|FQ455615
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349816846|gb|FQ399714.1|FQ399714
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|352790292|gb|FQ481491.1|FQ481491
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351022475|gb|FQ446997.1|FQ446997
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|110373005|gb|EC937208.1|EC937208
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349808495|gb|FQ405639.1|FQ405639
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351052838|gb|FQ456566.1|FQ456566
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351024245|gb|FQ423668.1|FQ423668
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351033979|gb|FQ463034.1|FQ463034
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349823559|gb|FQ414969.1|FQ414969
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACAGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|110711190|gb|EE087433.1|EE087433
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349819385|gb|FQ412279.1|FQ412279
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351025288|gb|FQ434301.1|FQ434301
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349813816|gb|FQ414050.1|FQ414050
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|352778080|gb|FQ467133.1|FQ467133
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCCACCAAAGATCAAGGCCATTEST: gi|110394254|gb|EC958925.1|EC958925
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351037566|gb|FQ462549.1|FQ462549
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351025464|gb|FQ435156.1|FQ435156
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTTGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|352799049|gb|FQ480898.1|FQ480898
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: CCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATACAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|352791382|gb|FQ480961.1|FQ480961
genomic: CCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351019788|gb|FQ439605.1|FQ439605
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351027277|gb|FQ444526.1|FQ444526
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|352786390|gb|FQ478999.1|FQ478999
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCGAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351038919|gb|FQ457594.1|FQ457594
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|110374436|gb|EC939192.1|EC939192
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|352763817|gb|FQ473520.1|FQ473520
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACCTATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|351053162|gb|FQ455619.1|FQ455619
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|27585311|gb|CB008006.1|CB008006
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|33402160|gb|CF207787.1|CF207787
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTEST: gi|349815482|gb|FQ400638.1|FQ400638
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
EST: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAG GTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
genomic: TGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGgtgaacaatt ... ttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATT
gctgatgacactgttggtgctgttatatgatgacatttgttgtatttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTCAAGAAAGATATAAGGGCAATCAG
tgctgat putative branch site (score: 3)
ttatatgat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| agcaagatgtttcatgtccatcattcccatgtaatattgacttctgctgatgacactgttggtgctgttatatgatgacatttgttgtatttgtatgtagGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTCAAGAAAGATATAAGGGCAATCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - -tcatgtc
- - - - - - - - - - -cattccc
- - - - - - - - - - - - - - - - - - - - - - - -tgatgac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -gttggtg