1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaaactcttggcaatattgaaatatctatgagtttgtccaaatcttagttaacttgaaagagttgctcattgatgcattaattcatatgtaattggttacttatttggtagcctagttgggttctatggaaaaaaaaaaggatgaacttctggcattcaaaatctgatgttttaaaaacccaattttctctgcagGAGGGAGAAGAGAACCTATTCCAACAGAAATTGAAGGAAGCTATTTGGGTCCCTCATCTTTTCCGGATTAGTGTTGCACAGCATGAGTACATGAATGAGA
species | Vitis vinifera |
transcript | Vv17s0000g07440.t01 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: AGAGAATGTTTGGGTGCTCTGCTGATGAGCTTGATAAGCTGAAATCACAG GAGGGAGAAGAGAACCTATTCCAACAGAAATTGAAGGAAGCTATTTGGGTC
genomic: AGAGAATGTTTGGGTGCTCTGCTGATGAGCTTGATAAGCTGAAATCACAGgtaaactctt ... ttctctgcagGAGGGAGAAGAGAACCTATTCCAACAGAAATTGAAGGAAGCTATTTGGGTC
gatgaacttctggcattcaaaatctgatgttttaaaaacccaattttctctgcagGAGGGAGAAGAGAACCTATTCCAACAGAAATTGAAGGAAGCTATTTGGGTCCCTCATCTTTTCCGGATTAGTGTTGCACAGCATGAGTACATGAATGAGA
atctgat putative branch site (score: 4)
ttttctctgc putative PPT
tgatgttttaaaaa TA-rich tract