Skip to another splice site:
1  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttggattttgttttgatggagttaaacaagctttaatttatgagttcttaccaaatgagtctttggagaagtatatattttcaaaatttgtcaagggttgttaacttagGTGGGAGAAGCTTCAAAATATTGCTTTAGGCATAGCCAAAGGAATTGAGTATCTTCACCAAGGTTGTGATAAAATAATTCTCCATTTGGATATCAAACCT

Basic information

species Vitis vinifera
transcript Vv16s0013g01220.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atgagtctttggagaagtatatattttcaaaatttgtcaagggttgttaacttagGTGGGAGAAGCTTCAAAATATTGCTTTAGGCATAGCCAAAGGAATTGAGTATCTTCACCAAGGTTGTGATAAAATAATTCTCCATTTGGATATCAAACCT
                                            tgttaac  putative branch site (score: 2)
            agaagtatatattttc  TA-rich tract