1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...tctacatgtgtattttgtttgtttaatgtgacattataacctcattatgttatttttttgcttttctcttgaaatgaaggctgatgttttgacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCGGTCTTGTAATTTTGTATTTGAACAAAGCTGAAGCTAGGGACAAGATAT
species | Vitis vinifera |
transcript | Vv15s0048g01890.t01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG TTGAATCCAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|71855306|gb|DT004361.1|DT004361
genomic: TCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|27585704|gb|CB008399.1|CB008399
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: GGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|161718258|gb|FC066959.1|FC066959
genomic: GGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30256397|gb|CB972240.1|CB972240
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|34543960|gb|CF512192.1|CF512192
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCGCTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30254158|gb|CB971173.1|CB971173
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|26260326|gb|CA811389.1|CA811389
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: GGCAT-ATCTAGGCACTCTTTTCG GTGAATTTAGGTTATAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|110701786|gb|EE079758.1|EE079758
genomic: GGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30255822|gb|CB971954.1|CB971954
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|110413573|gb|EC979363.1|EC979363
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30326206|gb|CD009468.1|CD009468
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|32267406|gb|CD716369.1|CD716369
genomic: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|33408880|gb|CF214507.1|CF214507
genomic: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30128631|gb|CB913970.1|CB913970
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: GTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30323004|gb|CD006266.1|CD006266
genomic: GTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|18459069|gb|BM437358.1|BM437358
genomic: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|32269651|gb|CD718810.1|CD718810
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|161716547|gb|FC066220.1|FC066220
genomic: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|28961058|gb|CB340537.1|CB340537
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: TTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|18458719|gb|BM436997.1|BM436997
genomic: TTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: GGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|71879185|gb|DT028240.1|DT028240
genomic: GGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|37190433|gb|CF609782.1|CF609782
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|26257001|gb|CA808064.1|CA808064
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|156735526|gb|EV239647.1|EV239647
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCTTCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|34544048|gb|CF512280.1|CF512280
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCGCTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|110687531|gb|EE065043.1|EE065043
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|161718317|gb|FC067266.1|FC067266
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|26257202|gb|CA808265.1|CA808265
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATCTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|71856241|gb|DT005296.1|DT005296
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|71856891|gb|DT005946.1|DT005946
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|32265320|gb|CD716909.1|CD716909
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|161711302|gb|FC059099.1|FC059099
genomic: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|71855655|gb|DT004710.1|DT004710
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|294964069|gb|GW837872.1|GW837872
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|29784482|gb|CB345278.2|CB345278
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: TCATCTAGGCACTCGATTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTEST: gi|30131945|gb|CB917284.1|CB917284
genomic: TCATCTAGGCACTC-TTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACT
EST: TCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGTACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|110730254|gb|EE107122.1|EE107122
genomic: TCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: TGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|71859218|gb|DT008273.1|DT008273
genomic: TGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|26264426|gb|CA815489.1|CA815489
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTCGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|110699462|gb|EE076482.1|EE076482
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: CTCTGGTTGTGGCTTTCGAGGCATCATCTCGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|110694713|gb|EE072070.1|EE072070
genomic: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|26262332|gb|CA813395.1|CA813395
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: TGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|32272185|gb|CD721344.1|CD721344
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|27583486|gb|CB006181.1|CB006181
genomic: CTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: GGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|77583842|gb|DV220955.1|DV220955
genomic: GGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: GGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30129202|gb|CB914541.1|CB914541
genomic: GGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|161720374|gb|FC069835.1|FC069835
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: GTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|110702542|gb|EE081378.1|EE081378
genomic: GTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30132633|gb|CB917972.1|CB917972
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|161721235|gb|FC070741.1|FC070741
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30133319|gb|CB918658.1|CB918658
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCEST: gi|30321490|gb|CD004752.1|CD004752
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
EST: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCG GTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
genomic: AGGCTCTCTCTGGTTGTGGCTTTCGAGGCATCATCTAGGCACTCTTTTCGgtactcctcc ... gacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTC
tatgttatttttttgcttttctcttgaaatgaaggctgatgttttgacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCGGTCTTGTAATTTTGTATTTGAACAAAGCTGAAGCTAGGGACAAGATAT
ttttgac putative branch site (score: 3)
tatttttttgctttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tctacatgtgtattttgtttgtttaatgtgacattataacctcattatgttatttttttgcttttctcttgaaatgaaggctgatgttttgacttagcagGTGAATTTAGGTTAAAAGATGAGTACTCTGGATGCAACTCGAGCAGAACTCGGTCTTGTAATTTTGTATTTGAACAAAGCTGAAGCTAGGGACAAGATAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - catgtgt
- - - - - - - - - - - - - - - - - - -aacctca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaatgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgatgt