Sequence
atgc intronic sequence ATGC exonic sequence...gaagtatgcccacctgctggattttctgtaccatctcatcgtgccgagatcaaaagaaccatctgaaataattgaagtcgaaaacgaaaatgaatcgaagGAAGGCAAAGAAGAATCTTTTGGAGACTCCAGTTAT
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.gagatcaaaagaaccatctgaaataattgaagtcgaaaacgaaaatgaatcgaagGAAGGCAAAGAAGAATCTTTTGGAGACTCCAGTTAT
aaataattgaa TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gaagtatgcccacctgctggattttctgtaccatctcatcgtgccgagatcaaaagaaccatctgaaataattgaagtcgaaaacgaaaatgaatcgaagGAAGGCAAAGAAGAATCTTTTGGAGACTCCAGTTAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - cccacct
- - - - - - - - - - - - - - - ccatctc
- - - - - - - - - - - - - - - - - - - -cgtgccg
- - - - - - - - - - - - - - - - - - - - - - - - - -aaaagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgaagtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaacgaa