1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ttttaaagacaaatataaggtgtttctttccagagattagttgtgtaatgcttgggtatggtaacattcatgtttgtaattttgtggcatatgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTGAGAGTGTAAAAGCTGCTCTTGCTAGCAGTGAAATTGAGCACAAAGCTG
species | Vitis vinifera |
transcript | Vv09s0018g01710.t01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351039210|gb|FQ457885.1|FQ457885
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349827356|gb|FQ421629.1|FQ421629
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|352795514|gb|FQ480102.1|FQ480102
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349812219|gb|FQ411814.1|FQ411814
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|352791460|gb|FQ481039.1|FQ481039
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351042630|gb|FQ451045.1|FQ451045
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351053774|gb|FQ441540.1|FQ441540
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACCGACAATCACACCTGAAGCTCTTEST: gi|349828848|gb|FQ419181.1|FQ419181
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349818650|gb|FQ403285.1|FQ403285
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351044071|gb|FQ452744.1|FQ452744
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|110365693|gb|EC929076.1|EC929076
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349808023|gb|FQ402414.1|FQ402414
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351048747|gb|FQ449615.1|FQ449615
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351037484|gb|FQ460683.1|FQ460683
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351047482|gb|FQ454974.1|FQ454974
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|27583752|gb|CB006447.1|CB006447
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTCEST: gi|30137999|gb|CB923337.1|CB923337
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351028807|gb|FQ433237.1|FQ433237
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349819475|gb|FQ413359.1|FQ413359
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351053076|gb|FQ456683.1|FQ456683
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351032515|gb|FQ458880.1|FQ458880
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351036139|gb|FQ463984.1|FQ463984
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351036156|gb|FQ464001.1|FQ464001
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|33404798|gb|CF210425.1|CF210425
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349809654|gb|FQ414544.1|FQ414544
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTNEST: gi|349813656|gb|FQ413890.1|FQ413890
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351053571|gb|FQ462646.1|FQ462646
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351057426|gb|FQ454108.1|FQ454108
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351016422|gb|FQ423849.1|FQ423849
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351037773|gb|FQ464214.1|FQ464214
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349817264|gb|FQ405268.1|FQ405268
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351040618|gb|FQ438162.1|FQ438162
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349824137|gb|FQ417524.1|FQ417524
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349810966|gb|FQ405954.1|FQ405954
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351053617|gb|FQ440126.1|FQ440126
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACACTCACACCTGAAGCTCTTEST: gi|351043158|gb|FQ451331.1|FQ451331
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGCGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351046990|gb|FQ454600.1|FQ454600
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|349819739|gb|FQ402676.1|FQ402676
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351054270|gb|FQ450352.1|FQ450352
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351043403|gb|FQ451455.1|FQ451455
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351022180|gb|FQ438765.1|FQ438765
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTEST: gi|351033445|gb|FQ462096.1|FQ462096
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
EST: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAG GCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
genomic: CAGCTTCGGCTCCTGGTGCTGGTGTCTACTCGCTCCCGCAATATCAGCAGgtgagaattt ... atgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTT
taatgcttgggtatggtaacattcatgtttgtaattttgtggcatatgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTGAGAGTGTAAAAGCTGCTCTTGCTAGCAGTGAAATTGAGCACAAAGCTG
tggtaac putative branch site (score: 2)
atgtttgtaatttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ttttaaagacaaatataaggtgtttctttccagagattagttgtgtaatgcttgggtatggtaacattcatgtttgtaattttgtggcatatgtaaacagGCTCATCAGTTATTCCAAAGGGATGCACAGACAATCACACCTGAAGCTCTTGAGAGTGTAAAAGCTGCTCTTGCTAGCAGTGAAATTGAGCACAAAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - -aagacaa
- - - - - - - - - - - - tctttcc
- - - - - - - - - - - - - - - - - - - - - - - - tgcttgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cattcat