Sequence
atgc intronic sequence ATGC exonic sequence...agcgatatgaacttggccaagtgatttgaagcacattttggtaaagaccataggtccgagatcttatggcgccaagaaggtttgcattggtttgcttcagACTCAAGCTCAAACAAGAGGGGAAGGGTAGAGAGCTAAAATCAAGGCTGCTGATGGCTGTCAATGAAAGTGGACTTGCATTCATGACTCATGCAGTGGTG
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.gaccataggtccgagatcttatggcgccaagaaggtttgcattggtttgcttcagACTCAAGCTCAAACAAGAGGGGAAGGGTAGAGAGCTAAAATCAAGGCTGCTGATGGCTGTCAATGAAAGTGGACTTGCATTCATGACTCATGCAGTGGTG
tttgcttc CT-rich tract
atcttat TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
agcgatatgaacttggccaagtgatttgaagcacattttggtaaagaccataggtccgagatcttatggcgccaagaaggtttgcattggtttgcttcagACTCAAGCTCAAACAAGAGGGGAAGGGTAGAGAGCTAAAATCAAGGCTGCTGATGGCTGTCAATGAAAGTGGACTTGCATTCATGACTCATGCAGTGGTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - -tatgaac
- - - - - - - - ccaagtg
- - - - - - - - - - - - - - aagcaca
- - - - - - - - - - - - - - - - - - - - - aaagacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cttatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccaagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgcattg