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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacagaaaaatatcaggaaaagataactaaccagctcttgttcgtgcagCTCAAAGATAGGAGACGTCGGGACACTCGCAACGACTTTGGACCCATGGACGTACTACAATATCCGCTCACAGCAAACCAGCAATACGGGTGGGGCATCG

Basic information

species Selaginella moellendorffii
transcript EFJ06427
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtacagaaaaatatcaggaaaagataactaaccagctcttgttcgtgcagCTCAAAGATAGGAGACGTCGGGACACTCGCAACGACTTTGGACCCATGGACGTACTACAATATCCGCTCACAGCAAACCAGCAATACGGGTGGGGCATCG
                              aactaac  putative branch site (score: 1)
                                        ctcttgttc  putative PPT
         agaaaaatat  TA-rich tract