1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaagttattggttctctacatgcttgatttggaatgagctcctgtgactggagttggttcttaagagaggaattttcattctcaaatgtatcaaatctatccaatcttaatttttgggtggacctgaggcagATATTTCTTGCGCTACTGTTCAATCCTCTTAATTTTTGTTACCGCTCTAGCCGGTTCTTCTTTTTGAACGTGATGCTACACATCGTCTGTGCACCCCTTT
species | Physcomitrella patens |
transcript | PP1S9_336V6.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CAGGACAAGCATCTCCTTATATTGATCTCATTCCTGTTGGTGTACTGCTG ATATTTCTTGCGCTACTGTTCAATCCTCTTAATTTTTGTTACCGCTCTAGC
genomic: CAGGACAAGCATCTCCTTATATTGATCTCATTCCTGTTGGTGTACTGCTGgtaagttatt ... cctgaggcagATATTTCTTGCGCTACTGTTCAATCCTCTTAATTTTTGTTACCGCTCTAGC
attctcaaatgtatcaaatctatccaatcttaatttttgggtggacctgaggcagATATTTCTTGCGCTACTGTTCAATCCTCTTAATTTTTGTTACCGCTCTAGCCGGTTCTTCTTTTTGAACGTGATGCTACACATCGTCTGTGCACCCCTTT
tcttaat putative branch site (score: 1)
aatcttaattttt TA-rich tract