1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...gccagacagcatgcagcatatgaggctctagtttgcattaaagcattcattttctctaggttttcaagtgttgcgtctaaccttgttgttttgctgctagATTTCATTTTGAACTGTCGTTTTCAAAGGACAACTTACATGGCGTCTTGTACGAGCCTTGGCATTGGCGATTTGTCGGGGATGACCATAGCCTTCATACC
species | Physcomitrella patens |
transcript | PP1S41_163V6.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AGTTTGATGAGGGAGCAGCATACAGATGGCTGGAACAAAACGGTGCTAG ATTTCATTTTGAACTGTCGTTTTCAAAGGACAACTTACATGGCGTCTTGTAEST: gi|37852321|gb|BJ610329.1|BJ610329
genomic: AGTTTGATGAGGGAGCAGCATACAGATGGCTGGAACAAAACGGTGCTAGgtaattgtat ... ttgctgctagATTTCATTTTGAACTGTCGTTTTCAAAGGACAACTTACATGGCGTCTTGTA
EST: AGTTTGATGAGGGAGCAGCATACAGATGGCTGGAACAAAACGGTGCTAG ATTTCATTTTGAACTGTCGTTTTCAAAGGACAACTTACATGGCGTCTTGTA
genomic: AGTTTGATGAGGGAGCAGCATACAGATGGCTGGAACAAAACGGTGCTAGgtaattgtat ... ttgctgctagATTTCATTTTGAACTGTCGTTTTCAAAGGACAACTTACATGGCGTCTTGTA
ttcattttctctaggttttcaagtgttgcgtctaaccttgttgttttgctgctagATTTCATTTTGAACTGTCGTTTTCAAAGGACAACTTACATGGCGTCTTGTACGAGCCTTGGCATTGGCGATTTGTCGGGGATGACCATAGCCTTCATACC
gtctaac putative branch site (score: 2)
ttgtttt putative PPT
ttttcaa TA-rich tract