1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gttagataactttacaatctctaccccattcattttcttatatatctatctgctttttcgctctgatggatttctttaatcgtcatacttctaactgccttgcgtgtcatatgttgcgtcaacttgttgtgcagAGGCGGATGAATGGGAAGTTGCCCCCTCATTTAAGGAACTGCTCGCGAATACTAACATACGATTCTGTCAAGACACTGTAAGGTCTATTCAACCATCTGA
species | Physcomitrella patens |
transcript | PP1S101_241V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GTCAGACCGATTTGTATTTAAGCCTCTGCTATATGAGCTCGTTTCTAAAG AGGCGGATGAATGGGAAGTTGCCCCCTCATTTAAGGAACTGCTCGCGAATAEST: gi|162174306|gb|FC350689.1|FC350689
genomic: GTCAGACCGATTTGTATTTAAGCCTCTGCTATATGAGCTCGTTTCTAAAGgttagataac ... tgttgtgcagAGGCGGATGAATGGGAAGTTGCCCCCTCATTTAAGGAACTGCTCGCGAATA
EST: GTCAGACCGATTTGTATTTAAGCCTCTGCTATATGAGCTCGTTTCTAAAG AGGCGGATGAATGGGAAGTTGCCCCCTCATTTAAGGAACTGCTCGCGAATA
genomic: GTCAGACCGATTTGTATTTAAGCCTCTGCTATATGAGCTCGTTTCTAAAGgttagataac ... tgttgtgcagAGGCGGATGAATGGGAAGTTGCCCCCTCATTTAAGGAACTGCTCGCGAATA
tcgtcatacttctaactgccttgcgtgtcatatgttgcgtcaacttgttgtgcagAGGCGGATGAATGGGAAGTTGCCCCCTCATTTAAGGAACTGCTCGCGAATACTAACATACGATTCTGTCAAGACACTGTAAGGTCTATTCAACCATCTGA
ttctaac putative branch site (score: 2)
atatgtt TA-rich tract