1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ctacacatgcagtttgaggtgtccgtaatcgaaccggtgggatgagatgagtagcgcattctgacatttcgagaaagtggtgcgcaattctactgtgtagGCCCAGAGTTTGAGAGCCGGGCAGCTGACCTGTACGTCCCCAGCGACGAGCGCTTCGATTACGTCAAGTTGAGCGATAACAAGGCGGATATGGCTCGAGC
species | Physcomitrella patens |
transcript | PP1S419_7V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTTCCCCTTTCCACGTAGAATGCGGACTGGCCGTCCCCCGACGAAATTCA GCCCAGAGTTTGAGAGCCGGGCAGCTGACCTGTACGTCCCCAGCGACGAGCEST: gi|162256626|gb|FC432936.1|FC432936
genomic: GTTCCCCTTTCCACGTAGAATGCGGACTGGCCGTCCCCCGACGAAATTCAgtaagcctcg ... tactgtgtagGCCCAGAGTTTGAGAGCCGGGCAGCTGACCTGTACGTCCCCAGCGACGAGC
EST: GTTCCCCTTTCCACGTAGAATGCGGACTGGCCGTCCCCCGACGAAATTCA GCCCAGAGTTTGAGAGCCGGGCAGCTGACCTGTACGTCCCCAGCGACGAGC
genomic: GTTCCCCTTTCCACGTAGAATGCGGACTGGCCGTCCCCCGACGAAATTCAgtaagcctcg ... tactgtgtagGCCCAGAGTTTGAGAGCCGGGCAGCTGACCTGTACGTCCCCAGCGACGAGC
gatgagtagcgcattctgacatttcgagaaagtggtgcgcaattctactgtgtagGCCCAGAGTTTGAGAGCCGGGCAGCTGACCTGTACGTCCCCAGCGACGAGCGCTTCGATTACGTCAAGTTGAGCGATAACAAGGCGGATATGGCTCGAGC
ttctgac putative branch site (score: 56)
ttctact putative PPT
aattcta TA-rich tract