1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' |
gtaagttccaataaacatacttttaagtttcttgcaaatgtgtcattcatgtggatgtagagttatgattcataggttacatgtttttaatggcctcattcctctgtttaaattttgatggtgtattactcatggttgtggcacttgtagttgtcttgtgctgatcgcaccaccacttgtgtgaagcagGTTCAAACGGTAACACAGAACCTGTCCCAGCAGTATCAGGCATGGAACTGGCAACTATCGATGCAACTTCCACGCAGGCACCTTCTCCTGGATTAAAAGC
species | Physcomitrella patens |
transcript | PP1S47_192V6.1 |
intron # | 22 |
splice site | 3' |
intron type | U2 |
EST: AGGCCGTGGAACAGTGGTGGAAATTCGAGAAGATATGCTCGCTAAGTTTG GTTCAAACGGTAACACAGAACCTGTCCCAGCAGTATCAGGCATGGAACTGGEST: gi|162193563|gb|FC370466.1|FC370466
genomic: AGGCCGTGGAACAGTGGTGGAAATTCGAGAAGATATGCTCGCTAAGTTTGgtaagttcca ... tgtgaagcagGTTCAAACGGTAACACAGAACCTGTCCCAGCAGTATCAGGCATGGAACTGG
EST: CGTGGAACAGTGGTGGAAATTCGAGAAGATATGCTCGCTAAGTTTG GTTCAAACGGTAACACAGAACCTGTCCCAGCAGTATCAGGCATGGAACTGGEST: gi|100407683|gb|BY991803.1|BY991803
genomic: CGTGGAACAGTGGTGGAAATTCGAGAAGATATGCTCGCTAAGTTTGgtaagttcca ... tgtgaagcagGTTCAAACGGTAACACAGAACCTGTCCCAGCAGTATCAGGCATGGAACTGG
EST: AGGCCGTGGAACAGTGGTGGAAATTCGAGAAGATATGCTCGCTAAGTTTG GTTCAAACGGTAACACAGAACCTGTCCCAGCAGTATCAGGCATGGAACTGG
genomic: AGGCCGTGGAACAGTGGTGGAAATTCGAGAAGATATGCTCGCTAAGTTTGgtaagttcca ... tgtgaagcagGTTCAAACGGTAACACAGAACCTGTCCCAGCAGTATCAGGCATGGAACTGG
gttgtggcacttgtagttgtcttgtgctgatcgcaccaccacttgtgtgaagcagGTTCAAACGGTAACACAGAACCTGTCCCAGCAGTATCAGGCATGGAACTGGCAACTATCGATGCAACTTCCACGCAGGCACCTTCTCCTGGATTAAAAGC
tgctgat putative branch site (score: 2)