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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacggcgcgatttcctatgctgttacatggttgaattggagcttgaacagggacattatttgatttttttcgtgtggtttttggtgatttaatgatggtttttacctagttactggtagggtgcgtgatactaacatggggaagccgggtattttatggtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTACGTGAGTGACAAGGGCACCATCGTCGAAGAGTAACTGGGAGGTCCTGCAT

Basic information

species Physcomitrella patens
transcript PP1S79_157V6.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S79_157V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EFJ13356 (Selaginella moellendorffii), 3'ss of exon 2
gtacggcgcgatttcctatgctgttacatggttgaattggagcttgaacagggacattatttgatttttttcgtgtggtttttggtgatttaatga-tggtttttacctagttactggtagggtgcgtgatactaacatggggaagccgggtattttatggtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTACGTGAGTGACAAGGGCACCATCGTCGA---AGAGTAACTGGGAGGTCCTGCAT
                                                                             || |  | |||   ||  |     | | |  |  || | | |      |||| |  |             |   | |||| || ||    ||||||||||| || ||||| || || ||| | ||||| |||||||||||||||||||| || ||||| || ||||  ||   |||||| ||    |     |   
-----------------------------------------------------------------------------gtatgagatgagagaagaagcaaatctcagtt--tttcagatctatctcgtggtgatgtt---------tctttttttttttgctgc---cagAAATGCCATGTGAAGAACAAGGACATCAGGAAGTTCTTGGATGGTATCTACGTGAGCGAGAAGGGGACGATCGCGGAGGAAGAGTAGCTTATGGTATGAG---

upper sequence: PP1S79_157V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EFJ11932 (Selaginella moellendorffii), 3'ss of exon 2
gtacggcgcgatttcctatgctgttacatggttgaattggagcttgaacagggacattatttgatttttttcgtgtggtttttggtgatttaatgatggtttttacctagttactggtagggtgcgtgatactaacatggggaagccgggtattttatggtgggta--cagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTACGTGAGTGACAAGGGCACCATCGTCGA---AGAGTAACTGGGAGGTCCTGCAT
                                                                                                       ||     | |  |     |    |   | |      | |  |  |  | || | |  |  |    ||||||||||| || ||||| || || ||| | ||||| |||||||||||||||||||| || ||||| || ||||  ||   |||||| ||    |     |   
------------------------------------------------------------------------------------------------------gtatgagatgagagaagaagcaaatatcagtttttcagaggtgatgtttcttcttttttttgctgccagAAATGCCATGTGAAGAACAAGGACATCAGGAAGTTCTTGGATGGTATCTACGTGAGCGAGAAGGGGACGATCGCGGAGGAAGAGTAGCTTATGGTATGAG---
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67723198|gb|BJ973457.1|BJ973457
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37824137|gb|BJ582203.1|BJ582203
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37830223|gb|BJ588235.1|BJ588235
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162227795|gb|FC402710.1|FC402710
EST:     AAGGTAACGACATCGAGCTTGTCTTTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATTTCCGAAAGTTTTTGGATGGTATTTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67722925|gb|BJ973184.1|BJ973184
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67722904|gb|BJ973163.1|BJ973163
EST:     AACGACATCGAGCNTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|18374859|gb|BJ206437.1|BJ206437
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAA
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAA
EST: gi|162218863|gb|FC394406.1|FC394406
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162275180|gb|FC451767.1|FC451767
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67725634|gb|BJ975893.1|BJ975893
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|208398835|gb|DC920783.1|DC920783
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67695570|gb|BJ955803.1|BJ955803
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67696154|gb|BJ956387.1|BJ956387
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37829378|gb|BJ587390.1|BJ587390
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37833767|gb|BJ591779.1|BJ591779
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67578179|gb|BJ950346.1|BJ950346
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37844343|gb|BJ602351.1|BJ602351
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162213892|gb|FC390091.1|FC390091
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162277770|gb|FC453609.1|FC453609
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162274636|gb|FC450754.1|FC450754
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37832763|gb|BJ590775.1|BJ590775
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162207962|gb|FC383668.1|FC383668
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67691391|gb|BJ951624.1|BJ951624
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37827379|gb|BJ585391.1|BJ585391
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162275181|gb|FC451768.1|FC451768
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37837647|gb|BJ595655.1|BJ595655
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|18372007|gb|BJ203609.1|BJ203609
EST:     AGGTAACGACATCGAGCTTGTCTCTCGGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAA
genomic: AGGTAACGACATCGAGCTTGTCTCTCGG-TCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAA
EST: gi|18365136|gb|BJ197210.1|BJ197210
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGA
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGA
EST: gi|37836842|gb|BJ594850.1|BJ594850
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67718364|gb|BJ968623.1|BJ968623
EST:     AAGGTAACGACATCNAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAN                         AAATGCCACGTTAANAANAAAGATATCCNAAAGTTTTTGGATGGNATCTA
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTA
EST: gi|67572203|gb|BJ945027.1|BJ945027
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37820971|gb|BJ579037.1|BJ579037
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67717716|gb|BJ967975.1|BJ967975
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37842453|gb|BJ600461.1|BJ600461
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67578716|gb|BJ950883.1|BJ950883
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67726225|gb|BJ976484.1|BJ976484
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|7046883|gb|AW476827.1|AW476827
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGACAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67709315|gb|BJ965131.1|BJ965131
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37853286|gb|BJ611294.1|BJ611294
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|18333688|gb|BJ165703.1|BJ165703
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162262278|gb|FC437189.1|FC437189
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67507458|gb|BJ940340.1|BJ940340
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162266233|gb|FC442165.1|FC442165
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67727483|gb|BJ977742.1|BJ977742
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37853518|gb|BJ611526.1|BJ611526
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|208377967|gb|DC906910.1|DC906910
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAN                         AAATGCCACGTTAAGAANAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67572175|gb|BJ944999.1|BJ944999
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37828806|gb|BJ586818.1|BJ586818
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67722606|gb|BJ972865.1|BJ972865
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67717111|gb|BJ967370.1|BJ967370
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162223165|gb|FC398795.1|FC398795
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67719178|gb|BJ969437.1|BJ969437
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67695542|gb|BJ955775.1|BJ955775
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67698867|gb|BJ959100.1|BJ959100
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67701045|gb|BJ961278.1|BJ961278
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37843670|gb|BJ601678.1|BJ601678
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|18365249|gb|BJ197323.1|BJ197323
EST:     AGGTAACGACATCGAGCTTGTCTCTCGGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGA
genomic: AGGTAACGACATCGAGCTTGTCTCTCGG-TCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGA
EST: gi|7648002|gb|AW738985.1|AW738985
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67704702|gb|BJ964935.1|BJ964935
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|7648322|gb|AW739305.1|AW739305
EST:     GCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: GCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162262279|gb|FC437190.1|FC437190
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162271820|gb|FC448953.1|FC448953
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67704410|gb|BJ964643.1|BJ964643
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGAT
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGAT
EST: gi|67719219|gb|BJ969478.1|BJ969478
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162268494|gb|FC444367.1|FC444367
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67723391|gb|BJ973650.1|BJ973650
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67508170|gb|BJ941041.1|BJ941041
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67726848|gb|BJ977107.1|BJ977107
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|18341901|gb|BJ173936.1|BJ173936
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGT
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGT
EST: gi|162227796|gb|FC402711.1|FC402711
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67569397|gb|BJ942221.1|BJ942221
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37848896|gb|BJ606904.1|BJ606904
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37836514|gb|BJ594522.1|BJ594522
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162268495|gb|FC444368.1|FC444368
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|19790064|gb|BQ041678.1|BQ041678
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37844074|gb|BJ602082.1|BJ602082
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37842339|gb|BJ600347.1|BJ600347
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67692658|gb|BJ952891.1|BJ952891
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67727520|gb|BJ977779.1|BJ977779
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|15261784|gb|BI437094.1|BI437094
EST:     TGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: TGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162277572|gb|FC453515.1|FC453515
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67575401|gb|BJ948225.1|BJ948225
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37842965|gb|BJ600973.1|BJ600973
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37838949|gb|BJ596957.1|BJ596957
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67716684|gb|BJ966944.1|BJ966944
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37833068|gb|BJ591080.1|BJ591080
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37849749|gb|BJ607757.1|BJ607757
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37851259|gb|BJ609267.1|BJ609267
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AGATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162274635|gb|FC450753.1|FC450753
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162271821|gb|FC448954.1|FC448954
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162205879|gb|FC381325.1|FC381325
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|162238955|gb|FC415119.1|FC415119
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|67725205|gb|BJ975464.1|BJ975464
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|7207446|gb|AW561447.1|AW561447
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
EST: gi|37844715|gb|BJ602723.1|BJ602723
EST:     AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAG                         AAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC
genomic: AAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 172

TGGTGTGAGCATCACCCGTTCCGAGAAGGTGAAGGACGAGCTTGTGCTTGAAGGTAACGACATCGAGCTTGTCTCTCGGTCGTGTGCTTTGATCAATCAGgtacggcgcg ... gtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTACGTGAGTGACAAGGGCACCATCGTCGAAGAGTAACTGGGAGGTCCTGCAT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggtagggtgcgtgatactaacatggggaagccgggtattttatggtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTACGTGAGTGACAAGGGCACCATCGTCGAAGAGTAACTGGGAGGTCCTGCAT
               tactaac  putative branch site (score: 172)
                                    tattttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacggcgcgatttcctatgctgttacatggttgaattggagcttgaacagggacattatttgatttttttcgtgtggtttttggtgatttaatgatggtttttacctagttactggtagggtgcgtgatactaacatggggaagccgggtattttatggtgggtacagAAATGCCACGTTAAGAAGAAAGATATCCGAAAGTTTTTGGATGGTATCTACGTGAGTGACAAGGGCACCATCGTCGAAGAGTAACTGGGAGGTCCTGCAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CGAAGA